KEGG   Sorghum bicolor (sorghum): 8081919
Entry
8081919           CDS       T01086                                 
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
  KO
K05391  cyclic nucleotide gated channel, plant
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    8081919
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:sbi04040]
    8081919
Ion channels [BR:sbi04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   8081919
SSDB
Motif
Pfam: Ion_trans cNMP_binding Ion_trans_2 DUF6525
Other DBs
NCBI-GeneID: 8081919
NCBI-ProteinID: XP_002452903
UniProt: A0A921UMS9 C5XTI7
Position
4:65118890..65128640
AA seq 764 aa
MTDQERDDIPMLLRNVELPRFPLRSTSMCIPVRDDEYEEDTFVPHTGPLFVQTPTQTAPG
ISFTSRDTPDRLPRPSQGKQVSKPHAIMPEEIRGNRWSYSGQVPKNEHLMMSGPLGQCDN
PDCVNCPPACKNKRHFQRGSNALDNKIHNILYGHSGGWKKKIEQIMAYIPIMNPHAKPVQ
QWNQFFVISCLIAIFIDPLFFFLLSVRQDGNCIVLNWNFATGLAVVRSVTDAIYFLHMLL
QFRLAYVAPESRVVGAGDLVDEPKKVAIHYLCGYFFLDFFVVLPLPQVMILLVVPKVGLS
AANYAKNLLRATVLLQYVPRIIRFVPLLDGQSANGFIFESAWANFVINLLMFVLAGHVVG
SCWYLFGLQRVNQCLRDACSASTIPYCDSFIDCGRGIGSGLYRQQWFNDLGAEACFNTGN
NATFQYGIYEQAVLLTTEDSAVKRYIYSLFWGFQQISTLAGNLVPSYFVWEVLFTMAIIG
LGLLLFALLIGNMQNFLQALGRRRLEMQLRRRDVEKWMSHRRLPEDLRRRVRRAERFTWA
ATQGVNEEELLSNLPEDIQRDIRRHFFRFLNKVRLFTLMDWPILDAICDKLRQNLYISGS
DILYQGGTVEKMVFIVRGKLESISADGSKAPLHDGDVCGEELLTWYLEHSSANRDGGKIK
FQGMRLVAIRTVRCLTNVEAFVLRASDLEEVTSQFARFLRNPRVQGAIRYESPYWRTIAA
TRIQVAWRYRKRRLKRAEKSRLSEETYTSHGILTPDSFQRGQRG
NT seq 2295 nt   +upstreamnt  +downstreamnt
atgactgaccaggagcgagatgacattcccatgttgctaagaaatgttgagctaccaaga
tttcctctaagaagtacttcaatgtgtataccagtcagggatgatgaatatgaagaagac
acctttgtaccccatactggtcctctattcgttcagacgccaactcagacggcaccggga
atttcatttacaagtagagacacacctgataggcttcctagaccttcacagggaaaacaa
gtcagcaagccacatgcaatcatgcctgaagaaattagaggaaataggtggtcttacagt
ggacaggttccaaagaatgaacatttgatgatgtctggacctttggggcaatgtgataat
cctgattgtgtgaattgccctcctgcttgtaaaaataaaagacatttccagagaggttcg
aatgctttagacaataagattcataacattctttatggtcacagtggtggatggaagaag
aaaattgagcagatcatggcatacattccgattatgaacccacatgcaaagccggttcag
cagtggaatcaattctttgtcatatcatgcctgattgccattttcattgatcccctgttc
ttcttcttactatcagtacgccaggatggcaactgcatagtgttaaattggaactttgct
acaggacttgctgttgtgagaagtgtgactgatgctatttatttcctgcacatgctgctt
cagttcagactggcttatgttgcgccagagtcacgagtggtgggagctggagacttggtt
gatgagccaaagaaagttgctatacattatctttgtggttactttttccttgatttcttt
gtggtgctcccactccctcaggtgatgatactgctagttgttcctaaagttgggttatct
gctgcaaactatgctaagaatttattgcgtgccactgttcttcttcaatatgtgccccgt
atcatcagatttgtgccacttcttgatggtcagtccgccaatggattcatatttgagtca
gcatgggctaattttgtgatcaatcttctgatgtttgttttggcgggacatgtggttggt
tcatgttggtatctctttggcttacagagggttaaccaatgtctacgagatgcttgttct
gcatcaaccattccatattgtgactcctttatagactgtggacgtggcattgggagtgga
ctgtacagacagcagtggttcaatgacttgggtgcagaagcttgttttaacactggaaat
aatgctactttccaatatggaatttatgagcaagctgttttgctaactacagaagacagt
gctgtaaaacgatatatatattcattattttgggggtttcagcaaataagtaccttagca
ggaaaccttgtcccgagttactttgtatgggaagttctgttcacgatggctattattggt
ctgggactgttgctttttgcattgcttattggaaacatgcaaaattttctccaagctctt
ggaagacggagattggaaatgcaacttaggcgacgtgatgttgaaaagtggatgagccat
agacgattgcctgaagatttgagaaggagggttagacgagctgaaaggttcacctgggca
gctactcaaggagtgaatgaagaggagcttttgagtaatttacctgaagatatccaaagg
gatatacgtcgccacttctttagattccttaataaggtccgattattcaccttgatggat
tggcctatcttggatgcaatatgtgacaaattaagacaaaacttatatattagtggaagt
gacattctttatcaaggtggcactgttgaaaagatggtcttcatagtgagagggaagctt
gaaagcatcagtgcagatggtagcaaggctccattacatgatggagatgtatgtggagag
gagctcctcacctggtacttggaacactcttcagcgaatagagatggtgggaaaattaaa
ttccaaggtatgcggttggttgctatacgcacagtaagatgtttaacaaacgttgaagct
ttcgtactcagagcaagtgatctggaagaagtcacctcacagtttgctcgattcttgcgt
aatccacgagtgcagggagcgatcagatatgaatccccctactggcgaaccattgctgca
actcgtattcaagttgcatggaggtatcgaaaaaggcggctgaagcgagctgagaagtcg
aggttgagcgaagaaacctatacctcacatgggatcttgacacctgattcttttcagcgt
ggacagaggggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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