KEGG   Sorghum bicolor (sorghum): 8084335
Entry
8084335           CDS       T01086                                 
Name
(RefSeq) coatomer subunit alpha-3
  KO
K05236  coatomer subunit alpha
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sbi04131]
    8084335
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sbi04147]
    8084335
Membrane trafficking [BR:sbi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    8084335
Exosome [BR:sbi04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   8084335
  Exosomal proteins of bladder cancer cells
   8084335
SSDB
Motif
Pfam: COPI_C Coatomer_WDAD WD40 ANAPC4_WD40 NBCH_WD40 Fis1_TPR_C zf-ribbon_3 zinc_ribbon_9
Other DBs
NCBI-GeneID: 8084335
NCBI-ProteinID: XP_021311582
Position
3:2602251..2608904
AA seq 1218 aa
MLTKFETKSNRVKGLAFHPRRPWILSSLHSGVIQMWDYRMGTLLNRFDEHDGPVRGVHFH
ATQPLFVSGGDDYKIKVWNYKTQRCLFTLHGHLDYIRTVQFHHECPWIVSASDDQTIRIW
NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKSASPADDILR
LTQMNTDLFGGIDAVVKYVLEGHDRGVNWASFHPSLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVLFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFCVSGDTVFYVKDRFLRFFEYSTQKEVQLAPIRRPG
SVSLNQSPRTLSYSPTENAVLICSDADGGSYELYIVPKDSAGRSDYLQEAKKGAGGSAVF
VARNRFAVLERSSNQVLVKNLKNEIMKKSPLPIATDAIYYAGTGNLLCKAEDRVAIFDLQ
QRLVLGELQTPAVKYVVWSSDMESVALLSKHAVVIASKKLVHQCTLHETTRVKSGAWDEN
GVFIYTTLNHMKYCLPNGDSGIIKTLDVPIYVTRVIGNNIFCLDRDGKNKLIAVDASEYI
FKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNI
QIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGYLDKVGF
MCKIAGQNNNLMGQFHNALYLGDAKKRIEILENAGQLPLAYVLAVTHGLTEIAERIAAEL
GENVPCLPEGKSHSLLIPPAPLTACGDWPLLRVMRGIFEGGLDATGRAELEEDDEASGAD
WGDEDLDIVDASEVVANGGDYFDAEEGEPNEEDGEEGGWDLEDLELPPDTETPKSAGNAR
SAVFVAPTAGIPVSQIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKPLFLDLH
MGSHSYLRALAAAPVISVAVEKGWNESASPNVRGPPALIFSFSQMEDRLKAAYKATTEGK
FPEALRQFLNILHTIPVIVVDSRREVDEVKELIEIVREYILGLKMELKRKELRDDVTRQQ
ELAAYFTNCKLQRIHMRLVLASAMALCFKQKNYATAKHFARMLLENSPQEAQARKARQVL
QACQDKDDSHQLNYDFRNPFVVCGATYVPIYRGQKDISCPYCGSRFVPSIEGQLCTICEL
AIVGADASGLLCSPTQLK
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgctcaccaagttcgagaccaagagcaaccgggtcaagggcctcgccttccacccgcgc
cgcccatggatcctgtccagcctccacagcggcgtcatccagatgtgggactaccgcatg
ggcaccctcctcaaccgcttcgacgagcacgacgggcccgtcagaggcgtccacttccac
gccacgcagccgctcttcgtgtccggaggtgatgattataagattaaggtctggaactac
aagactcaacgctgcctcttcacacttcatgggcaccttgattacattcgcactgtgcaa
ttccaccatgagtgcccatggatcgtaagtgctagcgacgatcagacaatccggatctgg
aattggcagtcacgcacatgtgtggccgtgctaactgggcataaccactatgtcatgtgt
gcctccttccatcctaaagaggatctggttgtatcggcctcgcttgatcagactgtacgt
gtctgggatattggggccctgaggaagaagtcagcatcacctgcagatgacatcctccgt
ctcactcagatgaacacggatctatttggaggcattgatgctgtagtcaaatatgtcttg
gaaggccatgaccgtggggtcaactgggcctcatttcatcccagtttgcctctcattgtt
tctggggcggatgaccggcaggtgaagatatggagaatgaatgataccaaggcttgggaa
gttgatacattgaggggccacatgaataatgtttcttgtgtgttgttccatgcgaagcaa
gacatcatcgtgtctaactcagaagacaaaagcattcgcatctgggatgccacaaagaga
actggcattcagacatttaggcgggaacatgaccgtttctggatccttgctgctcaccct
gaaatgaaccttcttgctgctggtcatgacagtggcatgattgtgttcaaattagagagg
gaacgcccagccttctgtgttagtggtgacacagttttctatgtgaaggatcggtttctc
aggttctttgaatactccacacagaaggaagttcagttggctccaataagaagacctgga
tcagtcagcttgaaccagtcgcccaggacactatcgtatagtccgaccgaaaatgctgtc
ttgatttgctctgatgctgatgggggttcatatgaactctacattgttcccaaggattct
gctggcaggtctgattacttgcaagaggcaaagaagggagctggtggttctgctgttttt
gtggcgcgcaacaggtttgcggtccttgagaggagtagcaatcaagttttggtgaagaat
ctgaagaatgaaatcatgaagaaaagcccccttcctattgcgacggatgcaatatattat
gctgggacaggtaacttgctatgcaaggctgaagaccgggtggccatctttgatcttcag
caaaggctagttctcggagagctacagacacctgctgtcaaatatgttgtttggtccagt
gatatggaatctgttgcactcctgagcaagcatgctgtggttatagctagcaagaagctt
gtccatcaatgcacactgcatgagaccacccgtgtgaaaagtggtgcctgggatgagaat
ggtgtgttcatctacactacactgaaccatatgaagtactgccttcctaatggagacagt
gggatcataaaaacccttgatgttcctatttacgtgacaagggttattgggaacaacatt
ttctgcctagatcgtgatggaaagaacaagctgattgcagttgatgcatcagagtacatt
tttaagctagcccttctcagaaaacgctatgatcatgttatgagtatgattaagaactcc
cagctgtgtgggcaggctgtgatttcttatttacaacagaaaggttttccggaagttgct
ctgcactttgtgaaggatgagaaaaccagatttaacttagctcttgagagtggtaacatt
caaattgcagttgcttctgcaaaggagattgatgacaaggatcactggtacaggttggga
attgaggccctgaggcaaggaaatgttggtattgtggaatatgcataccaacgaacaaaa
aattttgagaggcttgcttttctgtatctcattactggttacttggacaaggtgggcttc
atgtgcaaaattgctggacaaaataataatttgatgggacaattccacaatgcattgtat
cttggggatgctaagaagagaattgagatcttggaaaatgctgggcagctacctcttgct
tatgttcttgctgtcactcatgggctcactgaaattgctgagaggattgctgctgaatta
ggcgagaatgttccttgtctgcctgaaggaaaatcacactcgctactgattccccctgca
cctctcacagcctgcggtgattggccattgctgagggtaatgcgtggtattttcgaaggt
ggactggatgctactggaagggcagagcttgaagaagatgatgaagcttctggtgctgac
tggggtgatgaagacttggatattgttgatgcaagtgaagtggtggcaaatggtggtgat
tattttgatgcggaggagggtgaaccaaatgaggaggatggtgaggaaggtggctgggac
ttggaagatctggaacttccacctgatacagagactccaaaatctgctggcaatgctcgc
tctgctgtatttgtcgctccaacagcaggcatccctgtcagccaaatctggacacaaaaa
tcttctctggctggggagcatgcggctgcagggaactttgacacagcaatgaggttgctt
agccggcagttgggcatcaagaactttgctccgctgaagcccttgtttcttgatctgcat
atgggcagtcattcatatctccgcgcacttgctgctgctccggttatatctgttgctgta
gagaaaggttggaacgagtccgcaagtcctaatgtaagaggccctcctgcacttattttc
agtttctcacaaatggaagacagactcaaggccgcctacaaagctacaactgagggcaag
ttcccagaagcactgaggcagttccttaacatcttacataccatccctgtaatcgtcgta
gattcacggagagaagttgatgaagtgaaggaattaatcgagatagtgagggagtatatt
cttggtctgaagatggaactcaagagaaaggaattgagggatgatgtgacccgccaacag
gagttggctgcttacttcacaaactgcaagcttcagagaattcatatgaggcttgtgctt
gcaagcgccatggctctttgcttcaagcagaaaaactacgctactgcgaaacactttgca
aggatgcttcttgagaacagccctcaagaggcccaagcaaggaaggctcgacaggtgctg
caagcttgccaggataaggatgattctcaccaactgaactatgacttcagaaatccattt
gttgtttgtggcgctacatatgttcctatctaccgcggccaaaaggatatttcttgccca
tattgtggatcccggtttgttccttccatcgaagggcagctttgtaccatatgcgagctt
gccatagttggggcagatgcttcaggtctgctctgctcccctacgcagctgaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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