KEGG   Sorghum bicolor (sorghum): 8085441
Entry
8085441           CDS       T01086                                 
Name
(RefSeq) putative pectate lyase 21
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi00040  Pentose and glucuronate interconversions
sbi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    8085441
Enzymes [BR:sbi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     8085441
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 8085441
NCBI-ProteinID: XP_002456600
UniProt: A0A921RIL4 C5XP30
Position
3:66887021..66888564
AA seq 364 aa
MAPPPSDGQLGSEPTMEDTKSLLPYRTVDSSLRALAGQAEGFGRHAIGGLHGDVYHVTNL
DDDGPGSLREGCRRREPLWIVFDLSGTINLSSGVRVSSYKTIDGRGQRVKVSGWGLQLSE
CEHVIVCALEVEGGRGHDADAVQIKPRSRHVWVDRCTLRDFDDGLVDVTGGSTDVTISRC
HLASHDKAVLIGASSAHVEDRGIRVTIHHCFFDSTRQRHPRVRFGRVHLYNNFTRDWGIY
AVCASVEAQIISQCNIYEAGKKSEVFRYKEEQAADKEQSARGYIRSEGDLFLNDAKQHAA
AASESDAARDEPWDFKVQDSYESCSVQPASAALKVLLQSYAGWQPVPLPADVSLTEVDPA
DDTA
NT seq 1095 nt   +upstreamnt  +downstreamnt
atggctcctcctccatccgacggacagcttgggagcgagccgacgatggaagataccaag
tctcttctcccgtaccgcaccgtggactcctcgctgcgcgctctggccgggcaggccgag
ggcttcggccggcacgccatcggcggcctccacggcgacgtctaccacgtcacgaacctg
gacgatgacggccccggttccctccgagagggatgccgacggcgcgagccgctatggatc
gtcttcgacctgtccgggaccatcaacctctcctcgggcgtgcgcgtgtcgtcctacaag
accatcgacgggcgcgggcagcgcgtgaaggtgtccggctggggcctgcagctgagcgag
tgcgagcacgtgatcgtgtgcgcgctggaggtggagggcgggcgcgggcacgacgcggac
gcggtgcagatcaagccccggtccaggcacgtctgggtggaccgctgcacgctgcgggac
ttcgacgacggcctcgtggacgtgaccggcggcagcacggacgtgaccatctcccgctgc
cacctcgcgtcgcacgacaaggccgtgctcatcggcgccagcagcgcccacgtcgaggac
cgcggcatccgggtcaccatccaccactgcttcttcgacagcaccaggcagaggcacccg
cgcgtcaggttcggcagggtgcacctctacaacaacttcaccagggactggggcatctac
gctgtctgtgccagcgttgaagcacagattatctcccagtgcaacatttacgaggcagga
aagaagagcgaggtcttcaggtacaaggaagagcaggcagcagacaaggaacaaagcgca
agggggtacatcaggtccgaaggcgacctgttcctgaatgatgcaaagcagcacgctgct
gctgcttcagaatcagacgctgcaagagatgagccatgggacttcaaggtccaggactcc
tacgaatcttgttcggtccagcccgcgtcagcggcgctcaaggtgctcctgcagagctac
gccggttggcagccggttccgctcccggcagacgtttctcttacagaagttgaccctgct
gatgataccgcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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