KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_01g001080

Entry

SORBI_01g001080 CDS T01086

Gene name

SORBIDRAFT_01g001080, Sb01g001080

Definition

hypothetical protein

Orthology

K02358

elongation factor Tu

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi04626

Plant-pathogen interaction

Class

Organismal Systems; Environmental adaptation; Plant-pathogen interaction [PATH:sbi04626]

SSDB

Motif

Pfam:

GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 GTP_EFTU_D4 MMR_HSR1 MobB Miro

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 453 aa
MASAAVLRNAGSRRLFSYPALRATAISGPAALPDAPAAAAAAPAQPPPMAGTLWARSMAT
FTRTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARGITIAT
AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQ
VGVPSLVCFLNKVDAVDDPELLELVEMELRELLTFYKFPGDEIPIIRGSALSALQGNNDE
IGKNAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGEDV
EILGLTQSGPLKTTVTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVERGQVVCKPGSLKT
YKKFEAEIYVLTKDEGGRHTHFMTNYSPQFYFRTADVTGKVELLGETKMVLPGDNVTANF
ELISPVPLEPGQRFALREGGRTVGAGVVSKVIS

NT seq 1362 nt +upstreamnt +downstreamnt
atggcttccgccgcggtgctccggaacgccggctcccgccggctcttctcctacccagcc
ctgcgggcgaccgcgatctcgggtcccgccgcgctacccgatgcgcccgcggcggcggcg
gcggcgccggcccagccgccgcctatggccgggaccctctgggcgaggtccatggccacc
tttacgcgcacgaagcctcacgtgaacgtcggcaccattgggcacgtcgatcacggcaaa
accacgctcactgctgccattaccaaggttcttgccgaggcagggaaagccaaagccgtt
gctttcgacgagatcgacaaggctccggaagagaaagccagaggaatcaccattgcaacg
gctcatgtcgagtatgagacggctaaaaggcattatgctcatgttgattgcccaggtcac
gcagattatgtcaagaacatgatcactggagctgctcaaatggacggtggtattcttgtt
gtgtcagctcctgatggcccgatgccacaaacaaaggagcatattcttcttgcccgtcag
gttggtgtaccttcgcttgtgtgcttcttgaacaaagttgatgctgttgatgacccagag
ctactggaacttgtagagatggagcttcgggagctcctcactttctacaagttccccggt
gatgagattccgatcattcgtggatcggccttgtctgctttgcaagggaacaatgatgag
attggaaagaatgccattttgaaactaatggatgcagttgatgagtacatccctgatcct
gtgaggcagcttgataagcctttcttgatgccaattgaagatgtgttctctatccagggt
cgtggaactgttgttactgggcgtgttgaacagggaacaattaaaactggtgaagatgtt
gagatcttgggtttgacacagagtggtcccttgaagactacagttactggtgttgagatg
ttcaaaaagatactggaccatggagaggctggtgacaacgttggtcttcttcttcgtggt
cttaagcgtggtgatgttgagcgtggccaggtggtgtgtaaacctggtagtctgaagaca
tacaaaaagtttgaggcagaaatatacgtcctgacaaaggatgagggtggccgccacact
cactttatgacaaactacagtccccaattctacttcaggactgctgatgtcactggaaag
gttgagttgcttggtgaaacgaagatggttttgcccggtgacaatgttactgcgaatttt
gagttgatatcacctgttcctcttgaacctgggcaaagatttgcactgagggaaggaggg
agaacagttggtgcaggagttgtctccaaagttattagctaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-SBI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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