KEGG   Sorghum bicolor (sorghum): SORBI_01g025350Help
Entry
SORBI_01g025350   CDS       T01086                                 

Gene name
SORBIDRAFT_01g025350, Sb01g025350
Definition
hypothetical protein
Orthology
K11835  
ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.4.19.12]
Organism
sbi  Sorghum bicolor (sorghum)
Brite
Enzymes [BR:sbi01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     SORBI_01g025350 (SORBIDRAFT_01g025350)
Peptidases [BR:sbi01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   SORBI_01g025350 (SORBIDRAFT_01g025350)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1
AA seq 935 aa AA seqDB search
MTIPSAEGFLQASSCLPCTAAEEREVVDALTREAEKNVKHGDLRYLVSQSWWMEWQGYVG
IFSHGENGTEQFPQAMNRPGEIDNSKLVSAERINGSEEPELQRTLREGEHYTLVPQEVWQ
RLYEWYKGGPEIPRKVIFDNPIDKTYIVDVYPLCLKLIDGRDSCQKVFRISRKAKVHELY
SMVCSLMSVEQSEIVIWDYYQRSKGKKLLNQNETLEEAQLTMDQEILLEMKLGESSSGFS
TRSTNDELALIPLEPSTSSFSIAGGPTFSKGFSSGIGSSFSQDNSFSPLLRDSEDGYNSL
SNGTKDGTHGLSGLHNLGNTCFMNSAIQSLVHTPPLVQYFLEDYTCEINTENPLGLQGEL
AIAFGELLRKLWSSGRTSVAPRAFKSKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNR
VKKKPYIEAKDADGRPDDEFAEECWNYHKARNDSIIVDRFQGQYKSTLVCPVCNKISVTF
DPFMYLSLPLPSTVTRMITVTVFSGTGDVLPMPYTVTVQKNGNCRDLTKALADVCCLKDS
ETLLLAEVYERRIYRYLTNPIEGLHSIKDEDILVAYRLPVGYEKLLRLEILHRRADRFLV
EPQFNINRKLIGCPIVTCIPNGSTGKSDIYAAVSAVLVPFVRAKAHSPDVSAVKLNGNGP
SLDGIVLTDNGTTSEEGLSISRSSEDDNAAVDELLPFQLSLTDEKGSIRNAIDTDSNRGL
GLVIRVLMDWSEKEHGMYNIDYMDGLPEVFKPGFMSKKTRQEAVNLFSCLDAFLKEEPLG
PDDMWYCPGCKEHRQASKKLDLWRLPEILVVHLKRFSYSRYMKNKLDTFVNFPIHDLNMS
KYVKLTSRGDQHPMYELYAVINHYGGLGGGHYSAYAKLVEENNWYHFDDSHVSSVNEDEI
RTSAAYVLFYRRVGGSSTVANGGAVDIEMVDSIEM
NT seq 2808 nt NT seq  +upstreamnt  +downstreamnt
atgacgatcccgagcgcggaggggttcctccaggcgtcgagctgcctcccttgcacggcg
gcggaggagcgggaggtcgttgacgcgctcaccagggaggccgagaagaatgtcaagcac
ggggatctccgctatctcgtctcgcagagctggtggatggagtggcaaggttatgtgggc
atattcagtcatggagagaatggcaccgagcagtttcctcaggctatgaatagacctgga
gagattgataactcgaagcttgtttcggcagaaaggatcaatggtagtgaagagccagag
cttcaaaggaccttgagagaaggggagcactatactttggtgccgcaagaagtttggcaa
aggctatatgaatggtataaaggtggaccagaaatccctagaaaagttatttttgacaat
ccaattgacaagacttacatagtggatgtctaccctctctgtctaaaactaattgatgga
agggacagttgtcaaaaagttttcagaataagtagaaaggccaaagttcatgagctttac
tcaatggtttgctcactcatgtcagtagagcagtccgagattgtcatctgggattattac
caaaggtcaaagggcaaaaagttgcttaatcaaaatgagacactagaagaagctcaactt
actatggaccaggagatcctcttggagatgaagctgggcgagagcagttcaggtttcagt
acaagatccacaaatgatgaattagcattaattccattagaaccctccacatcatcattt
tctattgctggagggcctacattttcaaagggtttttcatctgggattggttctagtttt
tcacaagataatagcttcagtcctttattaagggatagtgaagatggttacaatagtctc
agcaatggaactaaagatggcactcatggattgagtggattacataacttgggtaataca
tgcttcatgaatagtgccatacaatccttggttcatacacctccactggtacagtacttt
ttggaggactatacttgtgaaataaacacagaaaatccactaggccttcagggtgaactt
gcgatagcatttggagagctacttagaaaactctggtcatctggtcgaacttctgttgct
ccacgtgcatttaaatcaaaactttctcgttttgctccacagttcagtggatataatcag
catgattctcaggagctacttgcgttcttgttggatggtctgcatgaagatctgaaccgt
gtaaaaaagaaaccatatattgaggcaaaggatgctgatggccgtccagatgatgaattt
gctgaagaatgctggaattaccataaagctcgaaatgactccataattgtagataggttt
caaggtcaatacaagtccacattggtgtgcccagtttgtaacaaaatctcagttaccttt
gacccatttatgtatttgtcgctgccattaccgtcaacagttactcggatgattactgta
actgtattcagtggtactggagatgttcttccaatgccttacactgtgactgtacaaaaa
aatggaaactgccgagatcttactaaagcccttgctgatgtttgctgcttaaaagattct
gagacattgttgcttgcagaggtatatgagcgtcggatctaccgttacctaacaaatcca
attgagggacttcatagtataaaagatgaagatatacttgttgcatataggctccctgtt
ggttatgaaaaacttttgaggttggagatcctgcatcggagggcagacagatttcttgtg
gagcctcagtttaatatcaacaggaagctcattgggtgccccattgtgacttgtattcca
aatggttctactggaaaatctgatatttatgcggctgtatctgctgttttggttccattt
gtacgagcaaaagcacatagccctgatgtgtctgctgtcaagttaaatggcaatgggcca
agcctggatggtattgtactgacggataatggcaccaccagtgaggagggtctctctata
tcaagatcaagtgaggatgataatgcagctgtcgatgagcttttaccgttccagctttca
ttgactgatgaaaaaggaagtataagaaatgctatagacacggattctaatcgtggttta
ggactagttattagggttttgatggattggtctgagaaagagcatgggatgtacaatatt
gattacatggatggacttcctgaagtcttcaagcctggttttatgtcaaagaagacccgg
caagaagcagtcaatttattttcatgcttggatgcttttctgaaggaggaacccctaggg
cctgacgacatgtggtactgtcctgggtgcaaggaacacaggcaagctagcaagaaactg
gacttgtggaggttacctgagatattagtagttcatttgaaaaggttctcatacagccgg
tatatgaagaacaagcttgatacatttgtgaattttccaatccatgacctcaatatgagc
aagtatgtgaagctgacatcaagaggtgaccagcaccccatgtatgaactctatgcagta
ataaatcattacggtggtcttggtggtggacactattctgcatatgcaaagctagtagaa
gagaacaactggtatcattttgatgatagtcatgtttcctctgttaatgaggatgagatc
aggacgtctgcagcatatgtgcttttctaccgacgagttggaggttcaagtacggtggca
aatggtggtgcagtcgacattgaaatggttgattcgatagagatgtag

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