KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_02g040190

Entry

SORBI_02g040190 CDS T01086

Gene name

SORBIDRAFT_02g040190, Sb02g040190

Definition

hypothetical protein

Orthology

K00026

malate dehydrogenase [EC:1.1.1.37]

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi00020	Citrate cycle (TCA cycle)
sbi00620	Pyruvate metabolism
sbi00630	Glyoxylate and dicarboxylate metabolism
sbi00710	Carbon fixation in photosynthetic organisms
sbi01100	Metabolic pathways
sbi01110	Biosynthesis of secondary metabolites

Module

sbi_M00012	Glyoxylate cycle
sbi_M00168	CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sbi00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:sbi00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:sbi00630]
Metabolism; Energy metabolism; Carbon fixation in photosynthetic organisms [PATH:sbi00710]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 388 aa
MAAAAIATLSFSSVPCKKRPRHGASSFDAQQFSNSSSYCHSLTLRPRVPRSRAVSRVVVA
QAGSGSYKVAILGAAGGIGQPLSLLAKMSPLVSALHLYDIANVEPVTADLSHCNTPAQVA
GFTGKDALAGCLSGADVVVIPAGVPRKPGMTRDDLFSVNAGIVRDLVAAVADHAPGALVH
VISNPVNSTVPIAAEVLKQKGAYDPRRLFGVTTLGVVRANAFVAARKGLPVAEVDVPVVG
GHAAATILPLLSKARPKAAFTDEEVEELTARIRDAGTEVVEAKAGAGSATLSMAYAAARF
LEASLRGLDGHDDVYECTYVQSQVVPELPFFACRVKLGRDGVEEVLGSELRGLTDYEARE
LEDLKPKLKASIDKGIAYVQQNQEAALN

NT seq 1167 nt +upstreamnt +downstreamnt
atggcagcggctgcaatcgcgaccctatccttcagttcagttccttgcaaaaaacggccc
cggcatggcgctagttccttcgacgcacaacagttcagtaactccagttcctactgtcac
tctctcactctaagaccaagagtgccaaggtcccgagccgtgagccgggtcgtcgtcgcg
caggccggcagcggcagctacaaggtggccatccttggcgcggcgggagggatcgggcag
cctctttctctgctggccaagatgtccccgctcgtctcggcgctgcacctgtacgacatc
gccaacgtggagcccgtgaccgccgacctcagccactgcaacaccccggcgcaggtcgcc
ggcttcacaggtaaagacgcgctcgcggggtgcctatcgggcgcggacgtcgtggtcatc
cccgccggcgtgccccggaagcccggcatgacgcgggacgacctgttcagcgtcaacgcc
ggcatcgtgcgcgacctcgtcgcggcggtggcggaccacgcgccgggcgcgctggtgcac
gtgatcagcaacccggtgaactccacggtgccgatcgccgccgaggtgctgaagcagaag
ggcgcgtacgacccgcggaggctgttcggcgtcacgacgctgggcgtggtccgcgccaac
gcgttcgtagcggcgaggaagggcctccccgtggcggaagtggatgtgccggttgtgggc
ggccacgcggcggctaccatcctgccgctgctgtccaaggcgcggcccaaggcggcgttc
acggacgaggaggtggaggagctcaccgccaggatccgggacgccggcaccgaggtggtg
gaggccaaggccggcgccgggtccgccacgctgtccatggcgtacgccgccgcgcggttc
ctcgaggcgtcgctgcgtggactcgacggccacgacgacgtgtacgagtgcacgtacgtg
cagtcgcaggttgtgccggagctcccgttcttcgcgtgcagggtgaagcttgggagggac
ggcgtggaggaggtgctgggttcagagctgaggggactcaccgactacgaggcgcgcgag
ctggaggatctcaagcccaagctcaaggccagcatcgacaagggcatcgcgtacgtgcag
cagaaccaggaggcagcgttgaactga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SBI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

Download RDF

DBGET integrated database retrieval system