KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_03g009790

Entry

SORBI_03g009790 CDS T01086

Gene name

SORBIDRAFT_03g009790, Sb03g009790

Definition

hypothetical protein

Orthology

K01051

pectinesterase [EC:3.1.1.11]

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi00040	Pentose and glucuronate interconversions
sbi00500	Starch and sucrose metabolism
sbi01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:sbi00040]
Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:sbi00500]

SSDB

Motif

Pfam:

Pectinesterase PMEI

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 597 aa
MASSTSATSCPCLLLTLLVLLLLMVMARRADASAVFAGLSFESPGEAEAFEDALLRQACV
NVSFLSGGRDREACVSRLDTARGGAGSGPVPVLRAALRDTLGEAVGAVRAVRGLASLSNR
PREEMAVRDCVELLGYSVDELGWALDAMAETDTETDASGGGSAARRAEDDLHAWLSAALG
NQDTCVEGFHGTDGRLLHRVEAAVAQLTQLVSNLLAMHKRLRSITPLLHHGPPTNKNNGT
SGGGAGDELPPWVMDIEVDDGDKQDQDEEELVAKRARAGRVSTRVDVVVAQDGSGRYRTV
SEAVARAPNHSKRKYVIYVKRGVYHENVEVRKKKTNIVIVGEGMGETVISGSRSFSSGWT
TFRSATFAVAGAGFVARDLTFRNTAGPAAHQAVALRVDSDRSAFFRVAVEGHQDTLYAHS
LRQLYRDCRVAGTVDFVFGNGIVVVQRSLVATLPLAPGQTGSVTAQGRKDPNQNTGFSFH
GCVVEGKYPTYLGRPWKPFSRVVVMESYLGPGIQARGWLEWAAAGSGDHSTGLATLFYGE
YKNYGPGAGVAGRVKWPGYHVIMDAAVASRFTVRRFIDGLAWLPGTGITFTADLFRK

NT seq 1794 nt +upstreamnt +downstreamnt
atggcgtcgtctacgagcgctaccagctgcccctgcctgctgctgacgctcttggtcctc
ctcctcctcatggtcatggcacgccgcgccgacgccagcgccgtgttcgccggcctgtcc
ttcgagagccccggtgaggcggaggccttcgaggacgcgctgctgcgccaggcctgcgtc
aacgtctcgttcctgtcgggtggccgcgaccgcgaggcctgcgtgtcgcggctcgacacg
gcccgcggcggcgcgggcagcgggcccgtgcccgtcctccgcgccgcgctccgcgacacg
ctcggcgaggccgtgggcgccgtgcgcgcggtccgcggactcgcctcgctgtccaaccgc
ccgcgcgaggagatggcggtgcgcgactgcgtcgagctcctgggatactccgtcgacgag
ctcgggtgggcgctggacgccatggccgagaccgacaccgagaccgacgccagcggcggc
ggctccgcggcgcggcgcgccgaggacgacctccacgcgtggctcagcgctgcgctcggc
aaccaggacacctgcgtggagggcttccacggcaccgacggccgcctgctgcaccgcgtg
gaggccgccgtagcgcagctcacgcagctggtcagcaacctcctcgccatgcacaagcgc
ctgcgcagcatcacgccgctgctgcaccatggacctcctactaataaaaacaacggcacc
tccggcggcggcgccggcgacgaactgccgccgtgggtgatggacatcgaggtcgacgac
ggcgacaagcaggaccaggacgaggaggagctcgtcgccaagcgcgcccgcgccggcagg
gtgtcgacgcgcgtggacgtcgtggtggcgcaggacggcagcgggcgctaccgcaccgtc
agcgaggcggtggcacgggcgcccaaccacagcaagcggaagtacgtgatctacgtgaag
cgaggggtgtaccacgagaacgtggaggtgaggaagaagaagaccaacatcgtcatcgtc
ggcgagggcatgggcgagacggtcatctccggcagccggagcttctccagcggctggacc
accttccggagcgccaccttcgcggtggccggcgccgggttcgtcgcgcgggacctgacg
ttcaggaacacggcggggccggcggcgcaccaggcggtggcgctgcgggtggactcggac
cgctccgccttcttccgcgtggcggtggaggggcaccaggacacgctgtacgcgcactcg
ctccggcagctctaccgggactgccgcgtcgccggcaccgtggacttcgtcttcggcaac
ggcatcgtcgtggtgcagcggagcctggtggccacgctgccgctggcgcccggccagacg
gggagcgtcaccgcgcagggccggaaggaccccaaccagaacacgggcttctccttccac
ggctgcgtggtggagggcaagtacccgacgtacctgggccgcccgtggaagcccttctcg
cgggtcgtcgtgatggagtcctacctgggccctggaattcaggcccgcgggtggctcgag
tgggccgctgccggctcaggggaccacagcacgggcctcgccacgctgttctacggagag
tacaagaactacgggcccggggcgggcgtcgcgggccgagtgaagtggcccggctaccac
gtgatcatggacgccgccgtcgccagccggttcaccgtcaggcgattcattgacgggctc
gcgtggctgcccggcaccgggatcaccttcacggccgatctcttcaggaaatga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SBI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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