KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_03g012820

Entry

SORBI_03g012820 CDS T01086

Gene name

SORBIDRAFT_03g012820, Sb03g012820

Definition

hypothetical protein

Orthology

K01051

pectinesterase [EC:3.1.1.11]

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi00040	Pentose and glucuronate interconversions
sbi00500	Starch and sucrose metabolism
sbi01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:sbi00040]
Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:sbi00500]

SSDB

Motif

Pfam:

Pectinesterase PMEI

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 565 aa
MAAAAFHTTTAALSAILALLLSLSLLVAVVRSDTAATPVTPSTACNETTDPNFCRTVLPS
NGTSNLYTYGRFSVAKSLANANKFLGLVNRYLTRGGGGLSPGAVAALQDCQLLSGLNIDF
LSSAGATLNTSGNSTLLDPQAEDVQTLLSAILTNQQTCADGLQVAAAAWSVRNGLAVPMV
NSTKLYSVSLSLFTRAWVRSSAKANKSKSKPPRHGGGHGRGLFDATDDEMVRRMALDGVA
AAVSVVGEVTVDPSGAGNYSTIGEAVAAAPTNLGGSTGYFVIRVPAGVYQENVVVPKNKK
YVMMIGDGIGLSVVTGNRSVVDGWTTFNSATFAVVGTGFVAVNMTFRNTAGPAKHQAVAL
RSGADLSTFYQCSFEAYQDTLYTHSLRQFYRGCDVYGTVDYVFGNAAVVFQDCNLYSRLP
MQGQSNTVTAQGRTDPNQNTGTTLQGCTVAAAPELAANTAFAVATYLGRPWKLYSRTVIM
QSEVDALVDPAGWMPWDGDYALSTLFYAEYNNSGPGADTSRRVAWPGFHVLNGTADAANF
TVGNMVLGDFWLPQTGVPFTSGLIN

NT seq 1698 nt +upstreamnt +downstreamnt
atggcagcagcggccttccacaccaccactgctgcgctctccgccatcctggcgctgctg
ctctccctgtccctgctcgtcgccgtggtccgctccgacacggcggccacgccggtgacg
ccgtccacggcgtgcaacgagacgacggaccccaacttctgccggaccgtgctcccgtcg
aacggcaccagcaacctctacacctacggccgcttctccgtggccaagtccctcgccaac
gccaacaagttcctcggcctcgtgaaccggtacctcacccgcggcggcggcggcctctcc
cccggcgccgtcgccgcgctgcaggactgccagctcctctccgggctcaacatcgacttc
ctgtcgtcggcgggcgccacgctcaacacgtcgggcaacagcacgctcctggacccgcag
gccgaggacgtgcagacgctgctgtcggcgatcctgaccaaccagcagacgtgcgccgac
ggcctgcaggtggccgccgccgcgtggtccgtgcgcaacgggctcgccgtgcccatggtc
aacagcaccaagctgtacagcgtctcgctgtcgctcttcaccagggcatgggtgcgttcg
tcggccaaggctaacaagtccaagtccaagccgccccgccatggcggcggccacgggagg
gggctgttcgacgccaccgacgacgagatggtccgcaggatggcgctcgacggcgtcgcg
gccgcggtctcggtggtcggcgaggtgacggtggacccgagcggcgcggggaactacagc
accatcggcgaggccgtggcggcggcgccgaccaaccttggcgggagcaccggctacttc
gtcatacgcgtgcccgcgggcgtgtaccaggagaatgtggtggtgcccaagaacaagaag
tacgtcatgatgatcggcgacggcatcggcctgtcggtggtcaccggcaaccggagcgtc
gtcgacggctggacgaccttcaactccgcaacgttcgctgttgttgggacagggttcgtg
gcggtgaacatgacgttccggaacacggcgggtccggcgaagcaccaggcggtggcgctg
cgttccggcgcggacctgtcgacgttctaccagtgcagcttcgaggcgtaccaggacacg
ctgtacacgcactccctccggcagttctaccgcggctgcgacgtctacggcaccgtggac
tacgtgttcggcaacgcggcggtggtgttccaggactgcaacctctactccaggctgccg
atgcaggggcagagcaacacggtgacggcgcaggggcgcacggacccgaaccagaacacg
ggcaccacgctccagggctgcaccgtcgccgccgcgcccgagctcgccgccaacacggcg
ttcgccgtcgccacctacctggggcggccatggaagctctactcccgcacggtgatcatg
cagtcggaggtggacgcgctcgtcgaccccgccgggtggatgccgtgggacggcgactac
gcgctcagcacgctcttctacgccgagtacaacaactccggccccggcgcggacaccagc
aggagggtggcatggccgggcttccacgtgctgaacggcaccgcggacgccgccaacttc
accgtcggcaacatggtgctcggggacttctggctgccccaaaccggtgtgccgttcacc
agcggtctcatcaactga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SBI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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