KEGG   Sorghum bicolor (sorghum): SORBI_03g012820Help
Entry
SORBI_03g012820   CDS       T01086                                 

Gene name
SORBIDRAFT_03g012820, Sb03g012820
Definition
hypothetical protein
Orthology
K01051  
pectinesterase [EC:3.1.1.11]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
Pentose and glucuronate interconversions
Starch and sucrose metabolism
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sbi00001]
 Metabolism
  Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    SORBI_03g012820 (SORBIDRAFT_03g012820)
   00500 Starch and sucrose metabolism
    SORBI_03g012820 (SORBIDRAFT_03g012820)
Enzymes [BR:sbi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.1  Carboxylic-ester hydrolases
    3.1.1.11  pectinesterase
     SORBI_03g012820 (SORBIDRAFT_03g012820)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
3
AA seq 565 aa AA seqDB search
MAAAAFHTTTAALSAILALLLSLSLLVAVVRSDTAATPVTPSTACNETTDPNFCRTVLPS
NGTSNLYTYGRFSVAKSLANANKFLGLVNRYLTRGGGGLSPGAVAALQDCQLLSGLNIDF
LSSAGATLNTSGNSTLLDPQAEDVQTLLSAILTNQQTCADGLQVAAAAWSVRNGLAVPMV
NSTKLYSVSLSLFTRAWVRSSAKANKSKSKPPRHGGGHGRGLFDATDDEMVRRMALDGVA
AAVSVVGEVTVDPSGAGNYSTIGEAVAAAPTNLGGSTGYFVIRVPAGVYQENVVVPKNKK
YVMMIGDGIGLSVVTGNRSVVDGWTTFNSATFAVVGTGFVAVNMTFRNTAGPAKHQAVAL
RSGADLSTFYQCSFEAYQDTLYTHSLRQFYRGCDVYGTVDYVFGNAAVVFQDCNLYSRLP
MQGQSNTVTAQGRTDPNQNTGTTLQGCTVAAAPELAANTAFAVATYLGRPWKLYSRTVIM
QSEVDALVDPAGWMPWDGDYALSTLFYAEYNNSGPGADTSRRVAWPGFHVLNGTADAANF
TVGNMVLGDFWLPQTGVPFTSGLIN
NT seq 1698 nt NT seq  +upstreamnt  +downstreamnt
atggcagcagcggccttccacaccaccactgctgcgctctccgccatcctggcgctgctg
ctctccctgtccctgctcgtcgccgtggtccgctccgacacggcggccacgccggtgacg
ccgtccacggcgtgcaacgagacgacggaccccaacttctgccggaccgtgctcccgtcg
aacggcaccagcaacctctacacctacggccgcttctccgtggccaagtccctcgccaac
gccaacaagttcctcggcctcgtgaaccggtacctcacccgcggcggcggcggcctctcc
cccggcgccgtcgccgcgctgcaggactgccagctcctctccgggctcaacatcgacttc
ctgtcgtcggcgggcgccacgctcaacacgtcgggcaacagcacgctcctggacccgcag
gccgaggacgtgcagacgctgctgtcggcgatcctgaccaaccagcagacgtgcgccgac
ggcctgcaggtggccgccgccgcgtggtccgtgcgcaacgggctcgccgtgcccatggtc
aacagcaccaagctgtacagcgtctcgctgtcgctcttcaccagggcatgggtgcgttcg
tcggccaaggctaacaagtccaagtccaagccgccccgccatggcggcggccacgggagg
gggctgttcgacgccaccgacgacgagatggtccgcaggatggcgctcgacggcgtcgcg
gccgcggtctcggtggtcggcgaggtgacggtggacccgagcggcgcggggaactacagc
accatcggcgaggccgtggcggcggcgccgaccaaccttggcgggagcaccggctacttc
gtcatacgcgtgcccgcgggcgtgtaccaggagaatgtggtggtgcccaagaacaagaag
tacgtcatgatgatcggcgacggcatcggcctgtcggtggtcaccggcaaccggagcgtc
gtcgacggctggacgaccttcaactccgcaacgttcgctgttgttgggacagggttcgtg
gcggtgaacatgacgttccggaacacggcgggtccggcgaagcaccaggcggtggcgctg
cgttccggcgcggacctgtcgacgttctaccagtgcagcttcgaggcgtaccaggacacg
ctgtacacgcactccctccggcagttctaccgcggctgcgacgtctacggcaccgtggac
tacgtgttcggcaacgcggcggtggtgttccaggactgcaacctctactccaggctgccg
atgcaggggcagagcaacacggtgacggcgcaggggcgcacggacccgaaccagaacacg
ggcaccacgctccagggctgcaccgtcgccgccgcgcccgagctcgccgccaacacggcg
ttcgccgtcgccacctacctggggcggccatggaagctctactcccgcacggtgatcatg
cagtcggaggtggacgcgctcgtcgaccccgccgggtggatgccgtgggacggcgactac
gcgctcagcacgctcttctacgccgagtacaacaactccggccccggcgcggacaccagc
aggagggtggcatggccgggcttccacgtgctgaacggcaccgcggacgccgccaacttc
accgtcggcaacatggtgctcggggacttctggctgccccaaaccggtgtgccgttcacc
agcggtctcatcaactga

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