KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_03g035090

Entry

SORBI_03g035090 CDS T01086

Gene name

SORBIDRAFT_03g035090, Sb03g035090

Definition

hypothetical protein

Orthology

K01595

phosphoenolpyruvate carboxylase [EC:4.1.1.31]

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi00620	Pyruvate metabolism
sbi00710	Carbon fixation in photosynthetic organisms
sbi01100	Metabolic pathways

Module

sbi_M00168	CAM (Crassulacean acid metabolism), dark
sbi_M00172	C4-dicarboxylic acid cycle, NADP+ -malic enzyme type

Class

Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:sbi00620]
Metabolism; Energy metabolism; Carbon fixation in photosynthetic organisms [PATH:sbi00710]

SSDB

Motif

Pfam:

PEPcase PEPcase_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 966 aa
MARNAVDKATSIDAQLRLLAPQKLSDDDKLVEYDALLLDRFLDILQDLHGEDIRETVQEC
YELAAEYENKLDPKMLDEIGNVLTDWDRGDSMVITKSFSHRLILANLAEEVQMAYRRRIK
LKKGDFVDENSATTESDIEETLKRLMHQLKKSPLEVLDALKNQTVDLVLTAHPTQSVRRS
LLQKHGRIRNCLTQLYAKDITPDEKQELDEALQREIQAAFRTDEIRRAPPTPQDEMRAGM
SYFHETIWKGVPKFLRRVDTALKNIGINERLPYNAPIIQFSSWMGGDRDGNPRVTPEVTR
DVCLLARMMAANLYNAQIEDLMFELSMWRCSDELRVKVDELQCSSKKDRTKHYIEFWKQV
PPSEPYRVILSDVRDKLYNTRERARHLLASGFSEIPEEATFTDVEQFLEPLELCYRSLCA
CGDQSIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITEYLGIGSYRKWTEEK
RQEWLLSELNGKRPLFGPDLPKSDEIADVLDTFHVLAELPSDSFGAYVISMATAPSDVLA
VELLQRECHVKKPLRVVPLFEKLADLEAAPAALARLFSVEWYRNRINGKQEVMIGYSDSG
KDAGRFSAAWQLYKAQEELINVAKMYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIH
GSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPISPKPEWRALMDEMAIVAT
KEYRSIVFEEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSAGIESLRAIPWIFAWTQTR
FHLPVWLGFGAAFKHVLDKDIRNLQTLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALYD
KLLVSEDLWSFGKRLRANYEETKQLLLQVAGHKDLLEGDPYLKQRLRIRDSYITALNVCQ
AYTLKRIRDPGFQVNPGPHLSKDVMDIGKPASELVKLNTTSEYAPGLEDTLILTMKGIAA
GMQNTG

NT seq 2901 nt +upstreamnt +downstreamnt
atggcgcgcaatgcggtggacaaggcgacgtccatcgacgcgcagctgcggctgctggcc
ccgcagaagctctccgacgacgacaagcttgtcgagtacgacgccctgctcctcgaccgg
ttcctcgacatcctacaggacctgcacggcgaggacatcagggagacggtgcaagaatgc
tatgagttagctgctgagtatgaaaataagcttgaccccaaaatgctggatgagattggg
aatgtgctgaccgactgggatcgcggagactccatggtcataaccaagtcattctcacac
agacttatcctggcaaacttggctgaggaggtacaaatggcataccgcaggagaataaaa
ctgaagaagggtgactttgttgatgagaactcagcaacaactgaatcagacatcgaggag
acattaaagaggcttatgcatcagcttaagaagtcccctctggaggtattagatgctctc
aagaatcaaactgttgaccttgtcctgactgcacatccaactcagtctgtccggagatca
ctgctccaaaagcatggcaggataagaaactgtttaactcaactttatgcaaaggacatc
actccagatgagaaacaggaacttgatgaagcacttcaaagagagattcaagctgccttt
agaaccgatgaaatcaggcgggcgcctcctactccgcaggatgaaatgcgtgctggaatg
agttattttcatgagaccatatggaagggtgtacccaagttcttacgcagggtcgacact
gctcttaagaacattggcataaatgagcggctgccatataatgcccctatcattcagttt
tcttcatggatgggtggtgatcgtgatgggaatccaagagtcacaccagaggttacaagg
gatgtgtgcttgttggctagaatgatggctgctaatttgtataatgcccagatagaagat
ctgatgtttgagttatctatgtggcgctgcagtgacgagttacgtgtaaaggtcgatgag
ttacaatgttcctccaagaaagatagaacaaaacactatatagagttctggaaacaagtt
ccccccagtgaaccttaccgagtgattctgagtgatgtcagagataaactctacaacacg
cgtgaacgagcacgccatttattagctagtgggttttctgaaattccagaggaagcaacc
ttcaccgatgttgaacagttcttggagcctcttgagctctgttacagatctctctgtgcc
tgtggtgatcaatctattgcagatggaagccttcttgacttcttacggcaagtgtctaca
tttggactatcccttgttagacttgatatcaggcaagaatctgaccgacatactgatgtt
atggatgctataactgaataccttggcatcggatcataccgtaaatggacagaggagaaa
cgccaagaatggctactctcagaacttaatggaaagaggccgttatttggtcctgacctt
cccaagtccgatgagattgctgatgttctagatactttccacgtattagctgaacttcct
tcagacagctttggtgcatatgtaatatctatggcgacagctccctcggatgttcttgct
gtcgagctcttgcagcgtgaatgtcatgtgaaaaaaccactgagagttgtgccattgttc
gaaaaactggcagatcttgaggcagcacctgcagctttagctcggctgttctctgttgaa
tggtacagaaacaggatcaatggcaagcaagaagtgatgattgggtattctgattctggc
aaggatgctggtcgtttctctgctgcttggcaactgtacaaggctcaagaggagctcatt
aatgttgctaagatgtatggggttaagttaactatgttccacggacgaggtgggactgtg
ggaagaggtgggggccctacccatcttgctatactgtcacaacctccagaaactattcat
ggatcgcttagggtaactgttcaaggtgaagtcattgaacaatcttttggagaggagcat
ttgtgctttagaaccctgcaacgtttcacagctgctactcttgaacatggtatgcatcct
ccaatttcgccaaaaccagaatggcgtgctttaatggacgaaatggctattgttgccaca
aaggaataccgatcaattgtgtttgaagaaccacgctttgttgagtatttccgccttgca
acaccagagatggaatatggtaggatgaatatcggaagcagaccatcgaaaagaaagccg
agtgcaggcattgaatcactgcgtgcaatcccttggatctttgcttggacgcagactcgg
ttccacctaccagtgtggcttggttttggcgcagcattcaaacatgtcttggataaggac
atacggaatcttcaaacccttcaagagatgtacaatcagtggccatttttcagggttaca
atagacttggttgagatggtgtttgccaaaggtgatcctggtatagcggctctgtatgac
aagcttctagtttcagaggatttgtggtcatttggcaagcgtcttagagccaactatgaa
gaaacaaagcaacttcttctacaggttgctgggcacaaagaccttctggagggcgaccct
tacctgaagcagaggctgcgcatccgtgactcttacatcaccgcgctgaacgtttgccaa
gcttacacgctgaagcgcatcagggaccctggcttccaggtgaacccggggcctcacctg
tcgaaggacgtcatggacattggcaagccggcttcagagctcgtgaagctcaacaccaca
agcgagtacgccccggggctggaggacaccctcatcctcaccatgaagggcatcgctgcc
ggaatgcagaacaccggctga

All links

Pathway (5)   
   KEGG PATHWAY (3)   
   KEGG MODULE (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-SBI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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