KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_03g036790

Entry

SORBI_03g036790 CDS T01086

Gene name

SORBIDRAFT_03g036790, Sb03g036790

Definition

hypothetical protein

Orthology

K01051

pectinesterase [EC:3.1.1.11]

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi00040	Pentose and glucuronate interconversions
sbi00500	Starch and sucrose metabolism
sbi01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:sbi00040]
Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:sbi00500]

SSDB

Motif

Pfam:

Pectinesterase PMEI

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 552 aa
MLSSNEPLLSSPYQRNASPCRRPVLLITLSSAALLCAGAAFLLLNLPTPDLCASSPDPTS
CHAIVADAVLASPRAHLTRPGPAQVLRAIVARSLVQHDAAAAAVSGMLRHTGSDSDPRQR
AALADCVQLMDLARDRLADASPAVAAAAADDARTWLSAALTYYATCTDGVVVDGPLRDAV
VARLEPLKSLASASLAVLSAVVDDSGSRDAGLADTTYTFPSWVPARDRALLEAGAAIEAD
VVVAQDGSGKFRTVKEAVDAAPDGGKSRYVIYVKKGVYKENVEVGKKKRELMIVGDGMDA
TVITGSRNVVDGATTFNSATLAVAGDGIILQDLRVENTAGPAKHQAVALRVSADRAVAYR
CRVDGYQDTLYAHALRHLYRECFVSGTVDFVFGNAAAVLQGCALAARLPLRGQQNAVTAQ
GREDPNQNTGTSLHRCRVVPAPDLAPVAGTDFPTFLGRPWKAYSRTVVMLSYLDAHVDAR
GWLEWDGDFALKTLFYGEYQNEGPGAATAGRVNWPGYHVITDRSVAVQFTVGQFIQGGNW
LNGTGVPYIEGL

NT seq 1659 nt +upstreamnt +downstreamnt
atgcttagcagcaatgagcctctcctctcctcgccctaccaaagaaacgcttctccatgc
aggaggcccgtcttgctgatcacgctgtcatcggccgctctgctttgcgccggagcagcg
ttcctcctcctcaacctccccactccggacctctgcgccagctccccggacccaacctcg
tgccacgccatcgtggccgacgccgtgcttgcgtctccacgagcgcaccttacccgcccc
ggccccgctcaggtcctccgcgcgatcgttgccaggtctctcgtgcagcatgacgcggcc
gccgccgcggtgtccggcatgctccggcacaccggtagcgatagcgacccgaggcagcgc
gcggcgctcgcggactgcgtccagctcatggacctcgcgcgggaccgcctcgccgacgcc
tccccggccgtggccgcggccgcagcggacgacgcgcggacgtggctcagcgccgcgctc
acctactacgcgacgtgcacggacggcgtcgtcgtcgacgggccgctgcgcgacgccgtg
gtggcgcggctggaaccgctcaagtcccttgcgagcgcgtcgctcgccgtgctaagcgcc
gtcgtcgacgactcgggctcccgggacgccgggctcgccgacactacgtacacgttcccc
tcgtgggtgccggcgcgagaccgcgctctccttgaagcgggcgccgccatcgaggccgac
gtcgtggtggcccaggacgggagcggcaagttcaggacggtgaaagaggcggtagacgcg
gcgcccgacggcggcaagagcaggtacgtgatctacgtgaagaaaggggtgtacaaggag
aacgttgaggtggggaagaagaagcgcgagctgatgatcgtgggcgacggcatggatgcg
acggtgatcaccgggagccgcaacgtggtcgacggcgccacgactttcaactcggccacc
ctagccgtggcgggagacgggatcatcctgcaggacctgcgggtggagaacacggcgggg
ccagcgaagcaccaggcggtggcgctgcgcgtgagcgccgaccgcgccgtcgcctaccgc
tgccgcgtcgacgggtaccaggacaccctgtacgcgcacgcgctccgccacctgtaccgc
gagtgcttcgtgtccggcaccgtcgacttcgtcttcggcaacgcggccgccgtgctgcag
ggctgcgcgctggcggcgcgcctgcccctgcggggccagcagaacgcggtcaccgcgcag
ggccgggaggaccccaaccagaacacgggcacgtccctccacaggtgccgcgtcgtgccg
gcgcccgacctggcgcccgtggccgggacggacttcccgacgttcctgggccggccgtgg
aaggcctactcgcggacggtcgtcatgctgtcgtacctggacgcgcacgtcgacgccagg
gggtggctcgagtgggacggggacttcgcgctcaagacgctcttctacggggagtaccag
aacgaggggcccggcgccgccaccgccggccgggtcaactggcccggctaccacgtcatc
acggacaggagcgtggccgtgcagttcaccgtcggccagttcattcagggtggcaactgg
ctcaacggcaccggcgtgccctacatcgagggtctctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-SBI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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