KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_05g016730

Entry

SORBI_05g016730 CDS T01086

Gene name

SORBIDRAFT_05g016730, Sb05g016730

Definition

hypothetical protein

Orthology

K13998

dihydrofolate reductase / thymidylate synthase [EC:1.5.1.3 2.1.1.45]

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi00240	Pyrimidine metabolism
sbi00670	One carbon pool by folate
sbi00790	Folate biosynthesis
sbi01100	Metabolic pathways

Class

Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:sbi00240]
Metabolism; Metabolism of cofactors and vitamins; Folate biosynthesis [PATH:sbi00790]
Metabolism; Metabolism of cofactors and vitamins; One carbon pool by folate [PATH:sbi00670]

SSDB

Motif

Pfam:

Thymidylat_synt DHFR_1

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 521 aa
MAAAPANGDSQSGPQRNYQVVVAATRDMGIGKDGVLPWKLLGDLKFFKELTLTTSDPAKK
NAVIMGRKTWESIPVKSRPLPGRLNVILTRSGSFDFATVENVVICGSMNSALELLASTPY
CLSIEKVFVVGGGQVLREYLNGPACEAIHLTDIQSSIECDTFIPPVDFSVFQPWYSSFPV
VESNIRHSFVTFVRVRKSVAETHESNGKESTEVDTKNDKFEIENFSFLPEMVYDRHEEYQ
YLNLVEDIIRSGAQKNDRTGTGTMSKFGCQMRFNLRKNFPLLTTKRVFWRGVVEELLWFI
SGSTNAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMHAD
YTGKGFDQLMDVIDKIKNNPDDRRIIMSAWNPSDLKKMALPPCHMFAQFYVENGELSCQM
YQRSADMGLGVPFNIASYSLLTYMIAQVCDLSPGDFVHVIGDAHVYRTHVRALEEQIQKM
PKPFPILKINPSKKDIDSFMASDFKLVGYDPHQKIEMKMAV

NT seq 1566 nt +upstreamnt +downstreamnt
atggctgcagctccggccaatggtgattcacagagtggtcctcagaggaactaccaggtt
gttgttgctgccactcgtgacatgggcattgggaaggatggggttctgccatggaagctt
cttggtgatcttaaattcttcaaagagcttacactaactacatctgatcctgccaagaag
aatgcagttataatgggaaggaaaacatgggagagcattcctgttaagtcaaggccattg
cctggtcgtttgaatgtcatacttactcgatctggtagctttgattttgcaacagtagag
aatgttgttatatgtggaagtatgaattctgccttagaactgctagcatcaactccatac
tgcttatcaattgagaaagtttttgttgtaggaggtgggcaggtactgagagaatatctt
aatggacctgcttgtgaggctatccatctaactgacattcagtcgagcattgagtgtgac
actttcatccctccagttgacttctcagtgttccagccatggtattcatctttcccagtg
gtagagagcaacattaggcattcttttgtgacttttgttcgtgttagaaagtcagtggca
gaaactcatgagtcaaatggcaaggaatcaactgaggttgataccaagaatgacaaattt
gaaatagagaatttctcttttctccccgagatggtatatgaccgccatgaggagtatcaa
tatctcaatcttgttgaagatattataagatctggtgctcagaaaaatgacaggacagga
actggaacaatgtcaaaatttggatgtcagatgcggttcaacttaaggaaaaattttcct
ctgctgacaacaaagagggtattttggcgtggtgttgtcgaagaactcctttggttcatc
agtggctcaacaaatgcaaaggttttgcaagagaagggtattcacatctgggatggcaat
gcttcaagagagtatcttgacagtgttggcttggcacacagggaggaaggtgatctaggt
ccagtttatggatttcaatggcgtcactttggtgctgaatacactgacatgcatgctgac
tatactggaaaaggttttgatcagctaatggatgtgattgacaagatcaagaataatcct
gatgaccgccgaataattatgtctgcgtggaatccttcagatctcaagaagatggctctt
cctccttgccacatgtttgcacaattttatgttgaaaatggggagctatcctgccagatg
tatcaacgctctgcagacatggggcttggtgttccattcaacatcgcatcatattctctt
ctgacatacatgatcgctcaagtttgtgatctttctcctggagattttgtccatgttata
ggggatgctcatgtctatagaactcatgttcgagctctggaggagcaaattcagaagatg
cctaaaccatttccaattttgaagataaatccttcaaaaaaggatatagattctttcatg
gcatcagacttcaagctggttggctatgatcctcaccagaagatagagatgaaaatggca
gtgtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (9)   
   KEGG ENZYME (2)   
   KEGG REACTION (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-SBI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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