KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_05g020150

Entry

SORBI_05g020150 CDS T01086

Gene name

SORBIDRAFT_05g020150, Sb05g020150

Definition

hypothetical protein

Orthology

K00660

chalcone synthase [EC:2.3.1.74]

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi00941	Flavonoid biosynthesis
sbi01100	Metabolic pathways
sbi01110	Biosynthesis of secondary metabolites
sbi04712	Circadian rhythm - plant

Class

Metabolism; Biosynthesis of other secondary metabolites; Flavonoid biosynthesis [PATH:sbi00941]
Organismal Systems; Environmental adaptation; Circadian rhythm - plant [PATH:sbi04712]

SSDB

Motif

Pfam:

Chal_sti_synt_N Chal_sti_synt_C ACP_syn_III ACP_syn_III_C FAE1_CUT1_RppA

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 401 aa
MAAATVTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKF
KRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKE
WGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKD
LAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPL
FQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYN
SIFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAED
GQATTGEGFDWGVLFGFGPGLTVETVVLHSVPITTGAAITA

NT seq 1206 nt +upstreamnt +downstreamnt
atggccgccgcgactgtgaccgtcgaggaggtgaggaaggcgcagcgcgcgacgggcccg
gccaccgtgctggcgatcgggacggcgacgccggccaactgcgtgcaccaggccgactac
ccggactactacttccggatcacaaagagcgagcacatgaccgaactcaaggagaagttc
aagaggatgtgcgacaagtcgcagatccggaagcggtacatgcacctgacggaggagtac
ctggcggagaaccccaacatgtgcgcgtacatggcgccgtcgctggacgcccgccaggac
atcgtggtggtggaggtgcccaagctaggcaaggccgcggcgcagaaggcgatcaaggag
tgggggcagccgaaatccaagatcactcacctcgtcttctgcaccacctccggcgtcgac
atgccgggcgccgactaccagctcaccaagatgctgggcctgcggccctcggtcaaccgc
ctgatgatgtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggac
ctcgccgagaacaaccgtggggcgcgcgtcctggtggtgtgctccgagatcaccgccgtc
acgttccgtggaccctccgagtcccacctcgactccatggttggccaagcgctgttcggc
gacggtgctgcggcggttattgtgggagctgaccctgacgagcgcgtggagcgcccgctg
ttccagctcgtgtcggcgtcgcagacaatcctgccggactccgagggcgccatcgacggc
cacctccgtgaggtcgggctcacgttccacctgctcaaggacgtgcccgggctcatctcc
aaaaacatagagcgctcgctggaggaggcgttcaagccgctggggatcaccgactacaac
tccatcttctgggtggcgcaccctggcgggccagcaatcctggaccaggtggaggccaag
gtcgggctagagaaggagcggatgcgtgccacgcgccatgtcctgtccgagtacggcaac
atgtctagtgcgtgcgtgctcttcatcctcgacgagatgcgcaaacgctccgccgaggac
ggccaggcaaccaccggcgaaggcttcgactggggcgtgctcttcggcttcggtcctggg
ctcaccgtcgagaccgtcgtgctccacagcgtccccatcaccaccggagcggccatcacc
gcgtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (16)   
   KEGG COMPOUND (16)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-SBI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (41)   

Download RDF

DBGET integrated database retrieval system