KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_05g020160

Entry

SORBI_05g020160 CDS T01086

Gene name

SORBIDRAFT_05g020160, Sb05g020160

Definition

hypothetical protein

Orthology

K00660

chalcone synthase [EC:2.3.1.74]

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi00941	Flavonoid biosynthesis
sbi01100	Metabolic pathways
sbi01110	Biosynthesis of secondary metabolites
sbi04712	Circadian rhythm - plant

Class

Metabolism; Biosynthesis of other secondary metabolites; Flavonoid biosynthesis [PATH:sbi00941]
Organismal Systems; Environmental adaptation; Circadian rhythm - plant [PATH:sbi04712]

SSDB

Motif

Pfam:

Chal_sti_synt_N Chal_sti_synt_C ACP_syn_III ACP_syn_III_C FAE1_CUT1_RppA

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 401 aa
MAAATVTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKF
KRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKE
WGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRVAKD
LAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPL
FQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYN
SIFWVAHPGGPAILDQVEAKVGLKKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAED
GQATTGEGLDWGVLFGFGPGLTVETVVLHSVPITTGAAITA

NT seq 1206 nt +upstreamnt +downstreamnt
atggccgccgcgactgtgaccgtcgaggaggtgaggaaggcgcagcgcgcgacgggcccg
gccaccgtgctggcgatcgggacggcgacgccggccaactgcgtgcaccaggcggactac
ccggactactacttccggatcacaaagagcgagcacatgaccgaactcaaggagaagttc
aagaggatgtgcgacaagtcgcagatccggaagcggtacatgcacctgacggaggagtat
ctggcggagaaccccaacatgtgcgcgtacatggcgccgtcgctggacgcccgccaggac
atcgtggtggtggaggtgcccaagctaggcaaggccgcggcgcagaaggcaatcaaggag
tgggggcagccgaaatccaagatcacccacctcgtcttctgcaccacctccggcgtcgac
atgccgggcgctgactaccagctcaccaagatgcttggcctccggccctccgtcaaacgc
ctgatgatgtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggac
ctcgccgagaacaaccgcggagcgcgtgtcctggtggtgtgctccgagatcactgccgtc
acattccggggaccctccgagtcccacctcgactccatggtcgggcaggcgctgttcggt
gatggcgcggcggcggttattgtcggtgctgaccccgacgagcgtgtggaacgcccgctg
ttccagctcgtgtcggcatcacagaccatcctcccagactctgagggcgccatcgatggc
cacctccgtgaggtcgggctcacgttccacctgctcaaggacgtgcccgggctcatctcc
aagaacatcgagcgctcgttggaggaggcgttcaagccactagggatcaccgactacaac
tccatcttctgggtggcgcaccccggtgggccagcaatcctggaccaggtggaggccaag
gtcgggctaaagaaggagcggatgcgcgcgacgcgacatgtcctgtccgaatacggcaac
atgtctagcgcctgcgtgctcttcatcctcgacgagatgcgcaagcgctctgccgaggat
ggccaggccaccaccggtgaaggcttggactggggtgtcctcttcggcttcggccccggg
ctcaccgttgagaccgtcgtgctccatagcgtccccattaccaccggcgcagccatcacc
gcctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (16)   
   KEGG COMPOUND (16)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-SBI (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (42)   

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