KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_05g020230

Entry

SORBI_05g020230 CDS T01086

Gene name

SORBIDRAFT_05g020230, Sb05g020230

Definition

hypothetical protein

Orthology

K00660

chalcone synthase [EC:2.3.1.74]

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi00941	Flavonoid biosynthesis
sbi01100	Metabolic pathways
sbi01110	Biosynthesis of secondary metabolites
sbi04712	Circadian rhythm - plant

Class

Metabolism; Biosynthesis of other secondary metabolites; Flavonoid biosynthesis [PATH:sbi00941]
Organismal Systems; Environmental adaptation; Circadian rhythm - plant [PATH:sbi04712]

SSDB

Motif

Pfam:

Chal_sti_synt_N Chal_sti_synt_C ACP_syn_III ACP_syn_III_C FAE1_CUT1_RppA

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 401 aa
MAGATVTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKF
KRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKE
WGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKD
LAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPL
FQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYN
SIFWVAHPGGPAILDQVEAKVGLKKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAED
GQATTGEGFDWGVLFGFGPGLTVETVVLHSVPITTGATITA

NT seq 1206 nt +upstreamnt +downstreamnt
atggccggcgcgactgtgaccgtggaggaggtgaggaaggcgcagcgcgcgacggggccg
gccaccgtgctggcgatcgggacggcgacgccggccaactgcgtgcaccaggcggattac
ccggactactacttccggatcacaaagagcgagcacatgaccgaactcaaggagaagttc
aagaggatgtgcgacaagtcgcagatccggaagcggtacatgcacttgaccgaggagtac
ctggcggagaaccctaacatgtgcgcgtacatggcgccttcgctggacgcccgccaggac
atcgtggtggtggaggtccccaagctaggcaaggccgcggcgcagaaggcgatcaaggaa
tgggggcagccgaaatccaagatcacccacctcgtcttctgcaccacctccggcgtcgac
atgccgggcgccgactaccagctcaccaagatgctgggcctaaggccctcggtgaaccgc
ctgatgatgtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggat
ctcgccgagaacaaccgcggggcgcgcgtcctggtggtgtgctctgagatcaccgccgtc
acgttccgtggcccctccgagtcccacctcgactccatggtcggccaggcgctgttcggc
gatggcgcggcggcggttattgtcggtgctgaccctgacgaacgcgtggaacgcccactg
ttccagctcgtgtcggcatcacagaccatcctcccagactctgagggcgccattgatggc
cacctccgtgaggtcgggctcacgttccacctgctcaaggatgtccctgggctcatctcc
aagaacatcgagcgctcgctggaggaggcgttcaagccgctagggatcaccgactacaac
tccatcttctgggtggcgcaccccggtgggccagcgatcctggaccaggtggaggccaag
gtcgggctaaagaaggagaggatgcgcgcgacgcgacatgtcctgtccgagtacggcaac
atgtctagcgcctgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgaggat
ggccaggccaccaccggcgaaggttttgactggggtgtcctctttggctttggccccggg
ctcaccgtcgagactgtcgtgctccacagcgtccccatcaccaccggagcgaccattacc
gcctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (16)   
   KEGG COMPOUND (16)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-SBI (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (42)   

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