KEGG   Sorghum bicolor (sorghum): SORBI_06g019430Help
Entry
SORBI_06g019430   CDS       T01086                                 

Gene name
SORBIDRAFT_06g019430, Sb06g019430
Definition
hypothetical protein
Orthology
K01609  
indole-3-glycerol phosphate synthase [EC:4.1.1.48]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:sbi00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    SORBI_06g019430 (SORBIDRAFT_06g019430)
  Amino acid metabolism
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    SORBI_06g019430 (SORBIDRAFT_06g019430)
Enzymes [BR:sbi01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.48  indole-3-glycerol-phosphate synthase
     SORBI_06g019430 (SORBIDRAFT_06g019430)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
6
AA seq 422 aa AA seqDB search
MEALAIGSAPPRPGLAALARYSHLRRPGTVTGTLVTAARRPVTAASMDAAAGGRPSPAPI
RCTSAETDAEVEVDEVATSSHAAGATTDTEQGGNGSPVAGAADSAEVVPGVDGIRIRRRP
VTGPAVHYVGPFQFRLENEGNTPRNILEKIIWDKDVEVSQMKERRPLYMLKGPLEAAPPA
RDFVGALKASYDRTGLPALIAEVKKASPSRGVIRENFDPVQIAQAYEKNGAACLSVLTDE
KYFQGSFNNLEAIRNAGVQCPLLCKEFIVDAWQLYYARSKGADAVLLIAAVLPDRDIKYM
LKICKILGMAALVEVHDEMEMDRVLGIDGVQLIGINNRNLETFEVDITNTKKLLEGERGQ
IIAQKDVIVVGESGLFTPDDISFVQNAGVKAVLVGESLIKQEDPGKAIAGLFGKDISHAG
AT
NT seq 1269 nt NT seq  +upstreamnt  +downstreamnt
atggaagcactagctatcggatccgcgcctccccggccgggcctcgctgccctcgcaagg
tactcccacctccgccgccccggaaccgtcaccggtactctagtcacagctgcgcgccgc
cccgtcacggcggcctccatggacgccgccgccggtggccgcccgagccccgcgcctatc
cgctgcaccagcgcggagacggacgccgaggtggaggtggatgaggtcgcgacgagctcg
cacgccgcgggggccaccacggacacggagcaagggggcaacgggagccccgtggcgggt
gccgcggactccgccgaggtcgtcccgggcgtcgacgggataaggatccggcggcggccc
gtcacggggcccgcggtgcactacgtgggcccgttccagttccgcctcgagaacgagggg
aacacgccgcggaacatcctcgagaagatcatctgggacaaggatgtagaggtttcgcag
atgaaggagaggaggcccctgtacatgctgaagggcccgcttgaggctgctccccccgct
agggactttgttggggcgctcaaggcgtcctatgatcgaactggcttgcctgctctgatc
gcggaggtcaagaaggcttcaccaagccggggtgttatcagggagaattttgatccggtt
cagatcgctcaggcatacgagaaaaacggagcagcatgccttagtgttcttacagacgaa
aaatactttcagggaagttttaacaacttggaggctattcgcaatgctggagtccagtgc
cctcttctgtgcaaagagttcattgttgatgcttggcaactttactatgcacggtccaag
ggtgcagacgctgttcttctaattgctgctgtattacctgaccgcgatatcaaatatatg
ttgaaaatttgcaagatacttgggatggctgctttagttgaggtccatgatgaaatggaa
atggaccgtgttttagggattgatggtgtacagctcatcggcatcaataaccgtaatctt
gagacatttgaagttgatattacaaacacaaaaaagcttctggagggtgaacgaggacaa
attatagctcaaaaggatgtaattgttgtaggagaatctgggctgttcactcctgatgat
atttcgtttgttcaaaatgctggggtcaaagcggttctcgtcggggaatccctcatcaag
caggaggatccagggaaagcaatcgctgggcttttcggcaaagatatctcgcacgctggt
gctacctaa

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