KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_06g024610

Entry

SORBI_06g024610 CDS T01086

Gene name

SORBIDRAFT_06g024610, Sb06g024610

Definition

hypothetical protein

Orthology

K00025

malate dehydrogenase [EC:1.1.1.37]

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi00020	Citrate cycle (TCA cycle)
sbi00620	Pyruvate metabolism
sbi00630	Glyoxylate and dicarboxylate metabolism
sbi00710	Carbon fixation in photosynthetic organisms
sbi01100	Metabolic pathways
sbi01110	Biosynthesis of secondary metabolites

Module

sbi_M00012	Glyoxylate cycle
sbi_M00168	CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sbi00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:sbi00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:sbi00630]
Metabolism; Energy metabolism; Carbon fixation in photosynthetic organisms [PATH:sbi00710]

SSDB

Motif

Pfam:

Ldh_1_C Ldh_1_N Lipase_GDSL_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 317 aa
MIARGLMLGPDQPVVLHMLDLPKSAETLNGVRMELIDAALPLLRGVVATSDEAEAFRGVN
FAVLIGGSPRREGMQRKDLIAKNVPIYQSQASALQQHAAPNCKVLVVANPANTNALVLKE
FAPAVPAKNITCLTRLDHNRALGQISEKLGVHVADVRNAIVWGNHSSTQFPDARHATART
QHGEKPVVELVADEKWLKEEFVSVVQQRGEAVIKARKQSSSLSAASAACDHMRDWILGTP
KECHFGLQGTWVSMGVYSDGSYGVPEGIFYSFPVTCDKGEWSIVQGLEVDDFARSKMELS
ANELDEERSMAYEFVSS

NT seq 954 nt +upstreamnt +downstreamnt
atgatcgcgaggggtctgatgcttgggccagaccagccggtggttctccacatgctggac
ctcccgaaatccgcggagactctgaacggcgtcaggatggagctgatcgatgccgcgttg
cctcttctcagaggtgtcgtggcaacgagcgacgaggccgaagcgttccgaggcgtcaac
ttcgccgtcctgatcggcggatcgccgaggagagaagggatgcagaggaaagacctgatc
gccaagaacgtgcccatctaccagtcccaggcctccgcgctgcagcagcacgctgcccca
aactgcaaggtccttgtcgtggctaaccctgcgaacacgaacgcgctggtgctgaaggag
ttcgcgcccgcggtgccggccaagaacatcacctgcctcacgcggctcgaccacaaccgc
gccctgggtcagatctccgagaagctgggcgtgcacgtcgccgacgtcaggaacgccatc
gtgtgggggaaccactcctccacgcagttccccgacgcccgacacgccaccgctaggacc
cagcacggggagaagcccgtcgtggagctcgtcgccgacgagaaatggttgaaggaggag
ttcgtcagcgtcgtgcagcagcgcggcgaggcggtgatcaaggcacgcaagcagtcgagc
tcgctgtccgccgccagcgccgcctgcgatcacatgagagactggatccttggtaccccg
aaggagtgtcattttggtctacagggcacgtgggtgtctatgggcgtgtactctgacggg
agctatggcgttcccgaggggatcttctactcgttcccggtgacatgcgacaagggagag
tggtctatcgtgcagggtcttgaggttgatgactttgcacggtccaagatggagctttcg
gcgaacgaactcgatgaagagaggtccatggcgtacgagttcgtcagctcttaa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SBI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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