KEGG   Sorghum bicolor (sorghum): SORBI_06g033130Help
Entry
SORBI_06g033130   CDS       T01086                                 

Gene name
SORBIDRAFT_06g033130, Sb06g033130
Definition
hypothetical protein
Orthology
K03144  
transcription initiation factor TFIIH subunit 4
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
Basal transcription factors
Nucleotide excision repair
Module
Holo-TFIIH complex
Brite
KEGG Orthology (KO) [BR:sbi00001]
 Genetic Information Processing
  Transcription
   03022 Basal transcription factors
    SORBI_06g033130 (SORBIDRAFT_06g033130)
  Replication and repair
   03420 Nucleotide excision repair
    SORBI_06g033130 (SORBIDRAFT_06g033130)
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     SORBI_06g033130 (SORBIDRAFT_06g033130)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
6
AA seq 451 aa AA seqDB search
MPQVMVVARNFMDMVAALPAGKLDMLYDSAFICEAVLRSLPPLAKKYALQMLYVLAPVTA
AAMEEWVLNEYAAKHKVAIDKLLQLRVFVEVRDRRRDVSYKMNQKFQGNMQKYLVDGGSL
PREPLPLSVTGRLPTPADLEAYALDQWECFLLQLINSSQVEKGTSFSSSMMKTFQRGLLS
SRDGEASKLTENGFQFLLMETNAQLWYIMREYISSAEERGVDPTELISFLLELSFHKLGA
AYSLNTLTDVQRIAIRDLAELGLVKQQQGRTDRWFIPTQLATNLSASLSDSSSNKEGFVV
VETNFRMYAYSTSKLHCEILRLFSRVEYQLPNLIVGAVTKESIYGAFENGITAEQIISFL
RQNAHPRVADKIPTVPENVTDQIRLWETDRNRVEMIPSHLYEDFPSKEWFEQCCDYARDN
GYLLWEDSKRMRLIVRGEFHPEMREFLRRQR
NT seq 1356 nt NT seq  +upstreamnt  +downstreamnt
atgccgcaggtaatggtggtggcacggaacttcatggatatggtggctgctcttcctgcg
ggcaagcttgatatgctctatgactcagcctttatctgtgaggcagtactcaggtcactt
cccccactggcaaagaagtatgcactgcagatgttgtatgtgttggcaccggtgaccgct
gcagcaatggaagagtgggtgctcaatgaatatgctgccaagcacaaggttgccattgat
aagcttctccaactcagggtctttgtcgaagtgcgcgacaggcgacgggacgtgagctac
aagatgaatcagaagttccagggaaacatgcagaagtatttggttgatggtggaagttta
ccaagggaacctttaccattaagtgtcactggtcgattgcccactccagcagatctggaa
gcctatgctcttgatcaatgggagtgcttcttgttgcaattgatcaattcatcccaagtc
gaaaaagggacaagttttagctcctccatgatgaagacatttcagcgtggtcttctgagt
tcaagggacggtgaagcttcaaagttgactgagaatggcttccaatttcttctgatggaa
acgaatgcacaactttggtacataatgagagaatacatttcatctgcagaggaacgtgga
gtggaccctacggaactgatatcatttctcttggaacttagctttcataaattgggagcg
gcttatagcttgaatactctgactgatgtccaaaggattgccatcagggatcttgcagaa
ttgggactagtcaaacagcagcagggtcgaacagatcgctggttcattcctacccaactg
gctactaatctctcagcaagtttgtcagattcatcatctaacaaagagggatttgtggtt
gtggagacaaactttcgaatgtatgcatactctacttccaaactgcactgtgaaattcta
cgccttttttcaagggtggagtatcaacttccaaacctcatcgtaggagctgttacaaaa
gaaagtatctatggtgcttttgagaatggaataactgctgagcagataatttcatttctt
agacaaaatgctcaccctcgtgttgctgacaagatacccactgtcccggagaatgtcaca
gatcagattaggctgtgggaaactgaccgcaacagggttgagatgattccatcacatctg
tacgaagattttcctagcaaggaatggtttgaacaatgctgtgattatgcaagggataat
gggtacttgctctgggaggactctaagagaatgagactgattgtacgaggggagttccac
cctgaaatgagggagttcctccgcaggcaaagatga

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