KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_07g002770

Entry

SORBI_07g002770 CDS T01086

Gene name

SORBIDRAFT_07g002770, Sb07g002770

Definition

hypothetical protein

Orthology

K01696

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi00260	Glycine, serine and threonine metabolism
sbi00400	Phenylalanine, tyrosine and tryptophan biosynthesis
sbi01100	Metabolic pathways
sbi01110	Biosynthesis of secondary metabolites
sbi01230	Biosynthesis of amino acids

Module

sbi_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:sbi00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sbi00400]

SSDB

Motif

Pfam:

PALP

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 476 aa
MAAATIRSPTRAAAAGGPAAAPTQQRSVLRVASSAASASSSSARTRRGAAAMQPAKAVAA
EAASPAVEMGNGAAVAGMQRPDAMGRFGKFGGKYVPETLMHALTELENAFHALATDEEFQ
KELDGILKDYVGRESPLYFAERLTEHYKRADGTGPLIYLKREDLNHTGAHKINNAVAQAL
LAKRLGKQRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLGAEV
RAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHKVIGKETRRQA
MDKWGGKPDVLVACVGGGSNAMGLFHEFVEDQDVRLIGVEAAGHGVDTDKHAATLTKGEV
GVLHGSMSYLLQDDDGQVIEPHSISAGLDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAF
KRVSRLEGIIPALETSHALAYLEKLCPTLPDGVRVVVNCSGRGDKDVHTASKYLDV

NT seq 1431 nt +upstreamnt +downstreamnt
atggccgccgccaccattcgcagccctacccgcgccgccgccgcaggaggacccgccgcg
gcgccgacgcagcagcgatcggtgctgcgggtggcgtcgtccgccgcgtcggcttcctcg
tcgtccgcccgcacgcggaggggtgcggccgcaatgcagccggccaaggcggtggccgcg
gaggcggcgtcccccgcggtggagatggggaacggcgcggcggtcgcggggatgcagagg
cccgacgccatggggaggttcgggaagttcggcgggaagtatgtccccgagacgctcatg
cacgcgctcaccgagctcgagaacgccttccacgcgctcgccaccgacgaagagttccag
aaagaacttgacggtattctcaaggactatgttggacgtgagagccccctctattttgcg
gagcgcctgacggagcactacaagcgcgccgatggcacaggcccgctcatctacctcaag
agggaggaccttaaccacaccggtgcccacaagatcaacaatgccgtggcgcaggccttg
ctcgccaagcgacttgggaagcagcgcatcattgctgagacaggggctggtcagcacggt
gtcgccactgccaccgtgtgcgcccgttttgggctgcagtgcatcatctacatgggtgcg
caagatatggagaggcaggcgctcaatgttttccggatgaggcttcttggtgcagaggtc
agggctgtacattctgggacagcaaccctgaaggatgcaacttcagaggctatccgcgac
tgggtcactaatgtggagactacacactacattttgggctctgttgctggtccgcaccca
tacccaatgatggtgagggagttccataaggttattggcaaggagacccggaggcaggcc
atggacaagtggggtggaaagccggatgtgttggttgcttgcgtcggtggtggatcaaac
gctatgggtttattccatgagtttgttgaggatcaagatgtgaggctgattggagtggag
gcagctggtcatggtgtagacactgacaagcatgctgctactttgacaaagggcgaagtt
ggagttctccacggatctatgagctacttgctgcaggacgatgatggacaagttattgaa
ccccactccatcagtgctgggctggactaccctggtgttggacccgagcacagtttcttg
aaggacattggacgtgctgaatacgacagcgtgactgatcaggaggcactggatgctttc
aagcgtgtctctcgtctggagggcatcatccctgccctggagacctcccatgcgctcgcc
tacctcgagaagctctgcccgaccctgccagacggcgtgagagtggtggtgaactgcagt
ggacgaggagacaaggacgtgcacaccgccagcaagtacctggacgtctaa

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-SBI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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