KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_08g005050

Entry

SORBI_08g005050 CDS T01086

Gene name

SORBIDRAFT_08g005050, Sb08g005050

Definition

hypothetical protein

Orthology

K00627

pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi00010	Glycolysis / Gluconeogenesis
sbi00020	Citrate cycle (TCA cycle)
sbi00620	Pyruvate metabolism
sbi01100	Metabolic pathways
sbi01110	Biosynthesis of secondary metabolites

Module

sbi_M00307

Pyruvate oxidation, pyruvate => acetyl-CoA

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:sbi00010]
Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sbi00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:sbi00620]

SSDB

Motif

Pfam:

2-oxoacid_dh Biotin_lipoyl E3_binding Biotin_lipoyl_2 Aminotran_1_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 458 aa
MAGLLNLQSTLLPSASALRRRAGAPGPSSSRRRCRVEAKIREIFMPALSSTMTEGKIVSW
TAAEGDRLAKGDPVVVVESDKADMDVETFHDGFLAAVLVPAGESAPVGSAIALLAESEEE
IPVAQSQAASFSSSSPSPPPPQETAAQEESLPPPPPPTPAPVAVSAPAPPSPAAQGGGRV
VASPYAKKLAKDLGVDLFSVTGSGPGGRIVAKDVESALAAPKKAVPATAARPDVPLGSTV
PFTTMQGAVSKNMVESLAVPTFRVGYTITTDALDQLYKKIKSKGVTMSALLAKATAMALV
QHPVVNSSCRDGKSFTYNSSINIAVAVAIDGGLITPVLQDADKLDIYSLSRKWKELVDKA
RAKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASEPTIVGTKDGRIGIK
NQMQVNVTADHRIIYGADLAAFLQTLAKIIEDPKDLTF

NT seq 1377 nt +upstreamnt +downstreamnt
atggccggcctcctcaacctccagtcgacgcttctcccctcggcgtccgcgctgcgccgc
cgcgcgggcgcgccggggccgtcctcgtcccgccgccgatgccgtgtcgaggccaagatc
cgggagatcttcatgccggcgctcagctccaccatgaccgagggcaagatcgtctcctgg
accgccgccgagggcgaccgactcgccaagggcgaccccgtcgtcgtcgtcgagtccgac
aaggccgacatggacgtcgagaccttccacgacggcttcctcgccgccgtcctcgtcccc
gccggcgagtccgcgcccgtcggctccgccatcgcgctcctcgccgagtccgaggaggag
atcccggtcgcccagtcgcaggccgcctccttctcctccagctccccctcgccgccgcct
ccgcaagaaactgctgctcaagaagagtcccttccgccgccgccacctcctaccccagcg
ccggtggcagtctctgctcccgcgccgccttcgccagcagcacaaggcggggggcgcgtt
gttgcttcgccctacgccaagaagctcgccaaggacctcggcgttgatcttttctcggtc
acggggtcaggccccggcgggcgaattgtggccaaggatgtcgagtctgcgcttgctgcg
cccaagaaggccgtaccagcgactgctgcacggccggatgtgccattgggatcgacggta
ccattcacgacaatgcagggtgctgtcagcaagaacatggtggagagccttgccgtcccg
acattcagggtcgggtacaccatcacgactgatgctcttgatcagctctacaaaaaaatt
aagtcaaagggggttacaatgtcagcactattggctaaggcgacggcaatggctctggtt
cagcatcctgtagtcaactccagctgcagggatgggaagagcttcacatacaacagtagt
atcaacattgctgtggcagtggccatagatggtgggttgattacaccggttcttcaagat
gctgataagcttgacatttattcattgtcaaggaaatggaaggagttggttgataaggca
cgagcaaagcagttgcagcctcatgagtacaactctggcacgtttactctttcgaatctt
ggtatgtttggagttgataggtttgatgcaatactgccacctggaactggagcaatcatg
gccgttggggcatcagaaccgaccattgttggtacaaaagatggtagaattgggatcaag
aaccaaatgcaggtaaatgttaccgctgatcatcggattatttatggagctgaccttgct
gcttttctgcaaacacttgccaagataattgaggatcccaaggatcttacattttaa

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-SBI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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