KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_08g016820

Entry

SORBI_08g016820 CDS T01086

Gene name

SORBIDRAFT_08g016820, Sb08g016820

Definition

hypothetical protein

Orthology

K11262

acetyl-CoA carboxylase / biotin carboxylase [EC:6.4.1.2 6.3.4.14]

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi00061	Fatty acid biosynthesis
sbi00620	Pyruvate metabolism
sbi00640	Propanoate metabolism
sbi01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:sbi00620]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:sbi00640]
Metabolism; Lipid metabolism; Fatty acid biosynthesis [PATH:sbi00061]

SSDB

Motif

Pfam:

ACC_central Carboxyl_trans CPSase_L_D2 CPSase_L_chain ATP-grasp_4 Biotin_carb_C ATPgrasp_Ter Biotin_lipoyl ATP-grasp_3 ATP-grasp Dala_Dala_lig_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 2248 aa
MAEPYQMNGILNGMPNLRHPSSPSEVDEFCKALGGDSPIHSVLVANNGMAAVKFMRSIRI
WALETFGTEKAILLVAMATPEDLRINAEHIRIADQFVEVPGGTNNNNYANVRLIVEIAER
TRVSAVWPGWGHASENPELPDALNEKGIIFLGPPSAAMAALGDKIGSSLIAQAAGVPTLP
WSGSHVKVPPESCHSIPEEIYKNACVSTTEEAVASCQVVGYPAMIKASWGGGGKGIRKVH
NDDEVRALFKQVQGEVPGSPIFIMKVASQSRHLEVQLLCDKHGNVAALHSRDCSVQRRHQ
KIIEEGPITVAAPDTVKELEQAARRLAKCVQYVGAATVEYLYSMETGEYYFLELNPRLQV
EHPVTEWIAEVNLPAAQVAVGMGIPLYNIPEIRRFYGMDHGGGYHDWRKISAVATKFDLD
KAQSVRPKGHCVAVRVTSEDPDDGFKPTSGRVESGGAIHEFSDSQFGHVFAFGESRSLAI
ANMVLGLKEIQIRGEIRTNVDYTVDLLNAAEYRENKIHTGWLDSRIAMRVRAERPPWYLS
VVGGALYEASSRSSSVVTDYVGYLSKGQIPPKHISLVNLSVTLNIEGSKYTIETVRGGPR
SYKLRMNGSEIEAEIHSLRDGGLLMQLDGNSHVIYAETEAAGTRLLINGRTCLLQKEHDP
SKLLADTPCKLLRFLVADGSHVDADTPYAEVEVMKMCMPLLLPASGVIHFVMPEGQAMQA
SDLIARLDLDDPSSVRRAEPFHGSFPKLGPPTAISGKVHQKFAASVNSAHMILAGYEHNI
NDVVQDLLNCLDSPELPFLQWQELMSVLATRLPKDLRNELDGKYKEYELNPDFCKSKDFP
AKLLRGVIEANLAYCSEKDRVTNERLVEPLMSLVKSYEGGRESHARVVVKSLFEEYLSVE
ELFNDNLQSDVIERLRLQHAKDLEKVVYIVFSHQGVRSKNKLILRLMEALVYPNPSAYRD
QLIRFSALNHTSYSELALKASQLLEHTKLSELRTSIARSLSELEMFTEEGERLSTPRRKI
AINERMEDLVCAPLAVEDALVALFDHSDPTLQRRVVETYIRRLYQPYLVSGSIRMQWHRA
GLIAIWEFSEEHLKQRIGQDVPLQQVENSTEKRWGVMVVIKSLQFLATAIDVALKETSQY
RVGVGSVSNGDHVNSNQSNMLHIALVGINNQMSTLQDSGDEDQAQERVNKLSKILKDNTI
TSHLNGASVKVVSCIIQRDEGRPPMRHSFQWSVDKLYYEEDPMLRHVEPPLSTFLELEKV
NLEGYNEVKYTPSRDRQWHIYTLIKNKKDQRLNDQRMFLRTIVRQPSATNGFLSGNIDNE
VGRTQASSSFTSNSILRSLMGALEEIELHAHSETVRSGHSQMYLCLLREQQLHELIPFSR
MTDEIDQDEGTACTLLKHMVLNLYEHVGVRMHRLSVCQWEVKLWLVCDGQASGAWRVVVT
NVTGHTCTIDIYREVEDPSTHQLLYHSATATAGPLHGVALNEPYKPLDAIDLKRYAARKN
ETTYCYDFPLAFETALKRLWKSSSYGVSEANERNQLYAEVKELIFVDSDGAWGTPLVSFE
RPPGINDIGIVAWNMKLSTPEFPSGREIIVVANDVTFKAGSFGPREDAFFDAVTNLACER
KLPLIYLAATAGARLGVAEEIKSCFHVGWSDDESPERGFQYIYLTTQDYSRLSSSVIAHE
LQLENGETRWVVDTIVGKEDGLGCENLHGSGAIASAYSKAYKETFTLTFVTGRAVGIGAY
LARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATNGVVHQTVSDDLE
GVSAILKWLSYVPPYVGGPLPIMKPLDPPERPVAYFPENACDARAAICGIQDGEGKWLGG
MFDRETFVETLEGWAKTVITGRAKLGGIPVGVIAVETQTVMQVIPADPGQLDSAERVVPQ
AGQVWFPDSAAKTAQALMDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRT
YKQPAFVYIPMGGELRGGAWVVVDSKINPDHIEMYAERTAKGNVLEAEGLVEIKFRPKEL
EDCMLRLDPELIGLNARLKDMKKQNASISEMETIRRSMTIRMKQLMPIYTQVATRFAELH
DTSARMAAKGVIGKVVDWEESRAFFYRRLRRRVAEDALAKEVKEAAGEQLSHRSALDSIK
KWYLVSKGTEGGSEMWNDDESFFAWKDDSKNYENYLEELKAERVSNWFSHLAESSDVKAL
PNGLSLLLNKMNPLKREQVIDGLRQLLG

NT seq 6747 nt +upstreamnt +downstreamnt
atggcggagccctaccaaatgaacggcatactgaacgggatgcctaatttgaggcatcca
tcctctccatcagaagtcgatgaattctgtaaagcgcttggtggtgactcgccaatacac
agtgtgctagtcgctaacaatgggatggccgcggtcaagttcatgcgcagcatccggata
tgggccctggagacctttgggacagagaaggccattcttttggttgctatggcaacaccg
gaggacttgaggataaacgctgagcacataagaattgctgatcagttcgtagaagttcct
ggaggaacaaacaataacaactatgcgaatgtacggcttatagttgagattgcagagaga
actcgtgtatctgcagtttggcctggctggggtcatgcgtctgagaacccagaacttcca
gatgctctaaacgagaaaggaatcatttttcttgggccaccatcagctgcaatggctgca
cttggtgataagattggttcttctctcattgcacaagcagcaggagttccaactcttcca
tggagtggatcacatgtaaaagttccaccagaaagctgccattcaattcccgaggagata
tataagaatgcttgtgtttccaccacagaggaagcagtggctagttgtcaggtggttggg
taccctgccatgatcaaggcatcttggggaggcggtggtaaaggaataagaaaggttcat
aacgatgatgaggtgagggcactgttcaagcaagttcaaggagaagtccctggctcgcct
atatttattatgaaagtggcatctcagagccgacatctggaggttcaattgctctgtgat
aaacatggcaatgtggcagcactacacagtcgagattgcagtgttcaaagaaggcaccaa
aagattattgaagaggggccaatcacagttgctgctccagacactgttaaagagcttgag
caggcagcaaggcggcttgctaagtgtgttcaatacgttggtgctgctaccgtagaatat
ctgtacagcatggaaacgggtgaatactattttttggagcttaatccacggttgcaggta
gaacatcctgtgactgaatggatagctgaagtaaacttgccagcagcccaagttgcagtc
ggaatgggcatacccctctataacattccagagattagacgcttttatggaatggaccat
gggggaggctaccatgattggaggaaaatatcagctgttgcaactaagtttgatttggat
aaagcacagtcagtgaggccgaagggccattgtgttgcagtcagagttactagtgaggat
cctgatgatgggtttaagcctacaagtggaagagtggagtctggaggagcaattcatgaa
ttctctgattcacagtttggtcatgtttttgcatttggggaatctagatctttagccata
gccaatatggtacttgggctaaaagagattcagatccgtggagagatacgcacaaatgtt
gattacacagtggatctcttgaatgccgcagagtaccgcgaaaataagatccatactggt
tggcttgacagcagaatagctatgcgtgttagagcagagaggcccccatggtacctctca
gttgttggaggagctctatatgaagcatcaagcaggagctcaagcgttgttactgattat
gttggttatctcagcaaaggtcagataccaccaaagcacatctcgcttgtcaatttaagt
gttactctgaacatagaggggagcaaatacacgattgagacagttaggggtggaccccgc
agctacaaattaagaatgaatggatcagaaattgaagcagagatacattcactgcgagat
ggtggacttttaatgcagttggatggaaacagtcatgtaatttatgcagagacggaggct
gctggtacacgccttctcattaatggtagaacatgcttactacagaaagaacatgatcct
tcaaagttgttggctgatacaccttgcaaacttcttcggttcttggttgccgatggctct
catgtggatgctgatacaccatatgctgaggtggaagtcatgaagatgtgcatgccactg
ttactgcctgcctctggtgtcattcactttgttatgcctgagggtcaggccatgcaggcg
agtgacctgatagcaagattggaccttgatgacccctcttctgtgaggagagctgaacca
tttcatggttcctttcccaaactgggacctcctaccgctatctctggcaaagttcatcaa
aaatttgctgcaagtgtgaattctgcacacatgatccttgcaggatatgaacataatatc
aatgacgttgtacaagatttgctaaactgcctagacagccctgagctcccttttctacaa
tggcaagaacttatgtctgttttagcaacacggcttccaaaagatcttaggaatgagttg
gatggtaagtacaaggagtatgaattgaatcctgacttctgcaagagtaaggatttccct
gcaaagttgctgaggggggttattgaggcaaatcttgcatactgttcggagaaagatagg
gttactaatgagaggcttgtggaaccacttatgagcctggtcaagtcatatgagggtgga
agagaaagccatgctcgtgttgttgtcaaatctctatttgaggagtatctgtctgttgaa
gagctcttcaatgataaccttcagtctgatgttatagagcgtctacgccttcaacatgca
aaagaccttgagaaggttgtatacattgtgttctcacaccagggtgtgaggagcaaaaac
aaattaatactacggcttatggaggcattggtatatccaaacccatctgcttacagggat
cagctgattcgcttctctgctttgaaccatacatcatattccgagctggcacttaaagca
agccaacttcttgagcacactaaattgagtgaacttcgcacaagcatagcaagaagcctt
tcagagctggaaatgtttactgaggaaggagagcgtttgtcaacacctaggagaaagata
gcgataaatgagagaatggaagatttagtttgtgctccactggcagttgaagatgctctt
gtagcgttgttcgatcacagtgatcctactcttcaacggagagtggttgagacatatata
cgcagattgtatcagccttatcttgtaagtggaagtatccggatgcaatggcaccgagct
ggcctaattgccatatgggagttctctgaagagcatcttaagcaaagaattgggcaagat
gtgcccctacagcaagtagagaattccactgagaagagatggggcgtcatggttgtaatt
aagtctctccagtttttagcaactgcaattgatgttgcactgaaggagacttcacagtac
agagtgggtgtcggaagtgtctcgaacggtgaccatgtaaattctaatcaaagcaatatg
cttcatattgctttggttggtatcaataatcagatgagtactctccaagacagtggtgat
gaggatcaagcacaagaaagggtcaacaaactatccaagattttgaaggataacactatt
acatcacatcttaatggcgctagtgttaaggttgtcagctgtattatccaaagagatgaa
gggcgtccaccaatgcgacactccttccaatggtctgttgacaagctttattatgaggag
gatccaatgcttcgccatgtggaaccgccgttgtctacattccttgagctggagaaagta
aatttggaaggttacaatgaagtaaaatacaccccatcacgtgatcgtcagtggcatatt
tatacacttatcaagaacaagaaagatcagagattaaacgaccagagaatgttccttcgt
accatagtcagacaaccaagtgcaacaaatggtttcctgtcaggtaatattgacaatgaa
gtaggccgcacacaagcttcatcgtcgttcacatcaaacagcattctcagatcattgatg
ggagcactagaagaaatagagctacatgctcatagtgagactgtgagatcaggccactca
cagatgtatctgtgcttactgagagaacaacaattgcatgaactaattccattttcaagg
atgactgatgaaattgatcaggatgaaggaactgcatgtacacttttgaagcatatggta
ttgaatttatatgaacatgttggggtcaggatgcatcgtctttctgtgtgccagtgggaa
gtcaagctctggttggtttgtgatgggcaagctagtggtgcttggagagttgttgttacc
aatgttactggtcacacctgcaccattgatatttaccgagaagtggaagaccccagcaca
catcagcttctctaccactctgccacagccacggctggtcctttgcatggtgttgcattg
aatgaaccatacaagcctttggacgctattgacctcaaacgttatgctgctaggaaaaat
gaaaccacatactgctacgatttccccttggcatttgaaacagcgctgaagagattatgg
aaatcaagtagctatggtgttagtgaagctaatgagcgcaatcaactctatgctgaagtg
aaagagcttatatttgttgattcggatggagcatggggcactccattggtttcatttgaa
cgccctccaggcatcaatgatattggcattgttgcttggaacatgaagctgtccacgcca
gaattcccaagtggccgggagattatagttgttgccaatgatgtgacatttaaagctggg
tcctttggtccaagagaagatgcattttttgatgctgttaccaatcttgcctgtgagagg
aaacttcctcttatctatctggcagcaactgctggtgccaggcttggtgtagctgaggaa
ataaagtcatgcttccatgtcggctggtctgatgatgagagccctgaacgtggttttcag
tacatttacctcactacacaagattactcacgtctaagctcttcagtaatagctcacgag
ctgcaactagaaaatggagaaaccagatgggtggttgataccattgttggtaaagaggat
ggacttggttgtgagaatctccatggaagtggtgcgattgccagtgcatattccaaggca
tacaaagagacctttactctgacatttgtgactggaagagctgttggcattggggcttat
ctggctcgtttaggtatgaggtgtatacaacgtcttgatcaaccaattattctgactggg
ttttctgcactaaacaagcttctggggcgggaggtgtacagttctcatatgcaattgggt
ggccccaaaatcatggctacaaatggtgttgtccaccaaactgtgtcagatgaccttgaa
ggtgtttctgctatcctgaaatggctcagttatgttcctccatatgttggtggtcctctt
cccattatgaaacccctggacccacccgaaagaccagtagcatacttccctgagaatgct
tgtgatgctcgtgcagccatctgtggcattcaagacggtgaagggaagtggttaggtggt
atgtttgatagggaaaccttcgtggaaacattggaaggttgggcaaaaacagttatcacc
ggaagagcaaagcttggtggaataccagttggtgtcatagctgtggaaacccagactgtg
atgcaagtcatcccagctgatccaggtcagcttgattccgctgagcgtgtagtccctcaa
gcaggtcaggtgtggttcccagattctgcagccaaaacagctcaggcattaatggatttc
aaccgtgaggagcttccactgttcatccttgcaaactggagaggtttctctggtgggcaa
agggatttatttgaaggaatccttcaggctggttcaacaattgttgagaatctgaggacg
tacaagcagcctgcttttgtatatatcccaatgggtggagagctacggggaggggcctgg
gttgtggtggacagcaagatcaatccggaccacatagagatgtatgctgagaggactgcg
aaagggaatgtccttgaggcagaaggattggtggagataaaattcaggccaaaggaactg
gaagattgcatgctaaggcttgacccagaattgattggcctgaatgctaggctgaaagac
atgaagaaacaaaatgccagcatctcggaaatggagaccatacggaggagtatgactatt
cggatgaagcagttgatgcctatttatactcaggttgccacacgatttgccgaattgcat
gacacctctgctagaatggctgccaaaggtgtgatcggtaaggttgttgattgggaagag
tctcgggccttcttctacaggagattgcgaaggagagttgctgaggatgccctggccaag
gaagttaaagaagctgctggtgagcagctttcccacagatcagcactagactctatcaag
aaatggtatctagtgtccaaaggaactgaaggtggtagtgaaatgtggaatgatgatgaa
tctttctttgcttggaaggatgattccaagaactatgaaaattatctcgaggagttgaag
gctgaaagagtatcgaactggttctcgcatcttgctgaaagttccgacgtgaaagctctg
ccaaacggtctttcactcctccttaacaagatgaatcctctgaagagggagcaggtcatt
gatggcctcaggcagcttcttggttga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (5)   
   KEGG ENZYME (2)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-SBI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (38)   

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