KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_08g018360

Entry

SORBI_08g018360 CDS T01086

Gene name

SORBIDRAFT_08g018360, Sb08g018360

Definition

hypothetical protein

Orthology

K01051

pectinesterase [EC:3.1.1.11]

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi00040	Pentose and glucuronate interconversions
sbi00500	Starch and sucrose metabolism
sbi01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:sbi00040]
Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:sbi00500]

SSDB

Motif

Pfam:

Pectinesterase Lact_bio_phlase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 432 aa
MARQNCHRPSGVALVAIAITATTLLLPCLVSVASSPEEEPLPSSSSSSDDSVAGNGGYGA
TNNNNIKMPAADGGAAGSFTEFVTENVELYSNVSSEQHKYGAGAGGKVWDPELLAAQGMA
LRYVVSPDGKGKFRSINEAIKAVPDGNKRRVILDIRTATYKEKVVVPYMKPFVTFSGNPK
NPPVIMWDDRAATRGKDGKPVGTYGSATVAVESDYFMASGVHFKNAAPLAAPGTEGGQAV
AVRVYGNKAAFYDCTFDGGQDTLYDHRGLHYFKSCHIQGTVDFIFGFGRSLYEDCAITSV
TKDVAIVTAQQRTRSIADALETGFSFLRCRIGSSTGAGQIYLGRAWGDSSRVVYAYTTMG
KEVVPVGWDKWTVQKPEHSGIYYGEYQCSGPGALPHKRVGWSLVLNDAQAKPFIGIHFIY
GDSWILPPPNLA

NT seq 1299 nt +upstreamnt +downstreamnt
atggcgcgccaaaactgccatcgtccgtctggtgttgctcttgttgcaattgcaataaca
gcaaccaccctgctgctaccatgcctcgtctcggtcgcatcctcgccggaggaggagcct
ttgccgtcgtcgtcgtcgtcgtccgatgactcggtggccggcaacggcggctacggggcc
actaacaacaacaacatcaagatgccggcggcggacggcggtgctgctggcagcttcacc
gagttcgtgacggagaacgtggagctgtacagcaacgtgagcagtgagcagcacaagtac
ggtgccggcgccggcggcaaggtctgggacccggagcttctggcggcgcagggcatggcg
ttgcggtacgtggtgagccccgacgggaagggcaagttcaggagcatcaacgaggccatc
aaggcggtgccggacgggaacaagaggagggtcatcctggacatccggacggccacctac
aaggagaaggtggtggtcccgtacatgaagccgttcgtcaccttctccggcaacccaaag
aacccgccggtgatcatgtgggacgacagggcggcgacgcggggcaaggacgggaagccc
gtgggcacctacggcagcgcgacggtggcggtggagtcggactacttcatggcgtcgggg
gtccacttcaagaacgcggcgccgctggcggcgccggggacggagggcgggcaggcggtg
gcggtgcgggtgtacgggaacaaggcggcgttctacgactgcaccttcgacggcggtcag
gacacgctgtacgaccaccgtggcttacactacttcaagtcgtgccacatccagggcacg
gtggacttcatcttcggcttcgggaggtcgctgtacgaggactgcgccatcacgtcggtg
accaaggacgtggcgatcgtgacggcgcagcagcggacgaggagcatcgccgacgcgctg
gagacggggttctcgttcctccggtgccggatcgggagctcgacgggcgccgggcagatc
tacctcggcagagcgtggggggactcgtcgagggtggtgtacgcgtacaccaccatgggg
aaggaggtggtgcccgtcggctgggacaagtggacggtgcagaagccggagcacagcggc
atctactacggcgagtaccagtgctccggccccggcgcgctgccgcacaagcgggtaggg
tggtcgctcgtgctcaacgacgcgcaggccaagccattcatcggcatccacttcatctac
ggcgactcctggatcctgccgccgccaaatctcgcctag

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SBI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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