KEGG   Sorghum bicolor (sorghum): SORBI_10g024680Help
Entry
SORBI_10g024680   CDS       T01086                                 

Gene name
SORBIDRAFT_10g024680, Sb10g024680
Definition
hypothetical protein
Orthology
K06001  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:sbi00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    SORBI_10g024680 (SORBIDRAFT_10g024680)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SORBI_10g024680 (SORBIDRAFT_10g024680)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    SORBI_10g024680 (SORBIDRAFT_10g024680)
Enzymes [BR:sbi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     SORBI_10g024680 (SORBIDRAFT_10g024680)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
10
AA seq 492 aa AA seqDB search
MAAAAALRPALSQGPEHRASLLCTPKHRVSASASRRSLRFTARASSNPGAQVSIPKQWYN
LIADLPVKPPPPLHPQTHQPLNPSDLSPLFPDELIRQEVTDERFVDIPEEVIDVYKLWRP
TPLIRARRLEKLLGTPAKIYYKYEGTSPAGSHKPNTAVPQAWYNAAAGVKNVVTETGAGQ
WGSALSFASSLFGLNCEVWQVRASFDQKPYRRLMMETWGAKVHPSPSTATEAGKRILEAD
PSSPGSLGIAISEAVEVAATNADTKYCLGSVLNHVLLHQTVIGEECLEQLAALGETPDVV
IGCTGGGSNFGGLAFPFLREKLRGNMSPAFRAVEPAACPTLTKGVYAYDFGDTAGLTPLM
KMHTLGHGFVPDPIHAGGLRYHGMAPLISHVYELGFMDAIAIQQTECFQAALQFARTEGI
IPAPEPTHAIAAAIREALECKRTGEEKVILMAMCGHGHFDLAAYEKYLRGDMVDLSHPAE
KLEASLAAVPKV
NT seq 1479 nt NT seq  +upstreamnt  +downstreamnt
atggccgccgccgccgcccttcgtcctgctctctcccaagggccagagcacagagcttcc
ctgctgtgcacaccgaagcacagagtttctgccagtgccagcaggagaagcttgagattc
accgctagggccagctcgaatccgggcgcccaggtgagcatcccgaagcaatggtacaac
ctcatcgccgacctgccggtgaagccgccgccaccactgcacccgcagacacaccagcct
ctgaatcccagcgatctctcccctctcttccccgacgagctgatcaggcaggaggtcacc
gacgagcgcttcgtcgacattcccgaggaggtcatcgacgtctacaagctctggcgcccg
acgcccctgatcagggccaggaggctggagaagctgctgggcacgccggcgaagatctac
tacaagtacgaggggacgagcccggcggggtcgcacaagcccaacaccgccgtgccgcag
gcgtggtacaacgccgcggcaggggtgaagaacgtggtcaccgagaccggcgccggccag
tggggcagcgcgctgtccttcgccagcagcctcttcggcctcaactgcgaggtgtggcaa
gtgcgcgcgtcgttcgaccagaagccgtaccggaggctgatgatggagacgtggggcgcc
aaggtgcacccgtcgccgtcgacggcgacggaggccggcaagaggatcctggaggcggac
ccgtcgagccccggcagcctcgggatcgccatctccgaggcggtggaggtggcggccacc
aacgccgacaccaagtactgcctgggcagcgtgctcaaccacgtcctgctccaccagacc
gtcatcggggaggagtgcctggagcagctggcggcgctcggcgagacgcccgacgtcgtc
atcggctgcaccggcggcgggtccaacttcggcgggctcgcgttcccgttcctgcgcgag
aagctgcgcggcaacatgagccccgcgttcagggccgtggagcccgcggcgtgccccacg
ctcaccaagggcgtctacgcctacgacttcggcgacacggccggcctcacgccgctgatg
aagatgcacaccctcggccacggcttcgtccccgacccgatccatgcaggtgggcttcgc
taccatggaatggcacctctgatctcgcacgtctacgagctgggcttcatggatgccatt
gctatacagcagactgaatgcttccaagctgccctgcaattcgccaggacggagggcatc
atcccggcgccggagccgacgcacgcgatcgcggcggcgatcagggaggcgctggagtgc
aagcggaccggggaggagaaggtcatcctgatggccatgtgcggccacggccacttcgac
ctcgccgcgtacgagaagtacctgaggggcgacatggtcgatctctcgcacccggcggag
aagctggaggcctccctcgctgccgtgcccaaagtctga

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