KEGG T01086: SORBI

Sorghum bicolor (sorghum): SORBI_10g024680

Entry

SORBI_10g024680 CDS T01086

Gene name

SORBIDRAFT_10g024680, Sb10g024680

Definition

hypothetical protein

Orthology

K06001

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi00260	Glycine, serine and threonine metabolism
sbi00400	Phenylalanine, tyrosine and tryptophan biosynthesis
sbi01100	Metabolic pathways
sbi01110	Biosynthesis of secondary metabolites
sbi01230	Biosynthesis of amino acids

Module

sbi_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:sbi00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sbi00400]

SSDB

Motif

Pfam:

PALP

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 492 aa
MAAAAALRPALSQGPEHRASLLCTPKHRVSASASRRSLRFTARASSNPGAQVSIPKQWYN
LIADLPVKPPPPLHPQTHQPLNPSDLSPLFPDELIRQEVTDERFVDIPEEVIDVYKLWRP
TPLIRARRLEKLLGTPAKIYYKYEGTSPAGSHKPNTAVPQAWYNAAAGVKNVVTETGAGQ
WGSALSFASSLFGLNCEVWQVRASFDQKPYRRLMMETWGAKVHPSPSTATEAGKRILEAD
PSSPGSLGIAISEAVEVAATNADTKYCLGSVLNHVLLHQTVIGEECLEQLAALGETPDVV
IGCTGGGSNFGGLAFPFLREKLRGNMSPAFRAVEPAACPTLTKGVYAYDFGDTAGLTPLM
KMHTLGHGFVPDPIHAGGLRYHGMAPLISHVYELGFMDAIAIQQTECFQAALQFARTEGI
IPAPEPTHAIAAAIREALECKRTGEEKVILMAMCGHGHFDLAAYEKYLRGDMVDLSHPAE
KLEASLAAVPKV

NT seq 1479 nt +upstreamnt +downstreamnt
atggccgccgccgccgcccttcgtcctgctctctcccaagggccagagcacagagcttcc
ctgctgtgcacaccgaagcacagagtttctgccagtgccagcaggagaagcttgagattc
accgctagggccagctcgaatccgggcgcccaggtgagcatcccgaagcaatggtacaac
ctcatcgccgacctgccggtgaagccgccgccaccactgcacccgcagacacaccagcct
ctgaatcccagcgatctctcccctctcttccccgacgagctgatcaggcaggaggtcacc
gacgagcgcttcgtcgacattcccgaggaggtcatcgacgtctacaagctctggcgcccg
acgcccctgatcagggccaggaggctggagaagctgctgggcacgccggcgaagatctac
tacaagtacgaggggacgagcccggcggggtcgcacaagcccaacaccgccgtgccgcag
gcgtggtacaacgccgcggcaggggtgaagaacgtggtcaccgagaccggcgccggccag
tggggcagcgcgctgtccttcgccagcagcctcttcggcctcaactgcgaggtgtggcaa
gtgcgcgcgtcgttcgaccagaagccgtaccggaggctgatgatggagacgtggggcgcc
aaggtgcacccgtcgccgtcgacggcgacggaggccggcaagaggatcctggaggcggac
ccgtcgagccccggcagcctcgggatcgccatctccgaggcggtggaggtggcggccacc
aacgccgacaccaagtactgcctgggcagcgtgctcaaccacgtcctgctccaccagacc
gtcatcggggaggagtgcctggagcagctggcggcgctcggcgagacgcccgacgtcgtc
atcggctgcaccggcggcgggtccaacttcggcgggctcgcgttcccgttcctgcgcgag
aagctgcgcggcaacatgagccccgcgttcagggccgtggagcccgcggcgtgccccacg
ctcaccaagggcgtctacgcctacgacttcggcgacacggccggcctcacgccgctgatg
aagatgcacaccctcggccacggcttcgtccccgacccgatccatgcaggtgggcttcgc
taccatggaatggcacctctgatctcgcacgtctacgagctgggcttcatggatgccatt
gctatacagcagactgaatgcttccaagctgccctgcaattcgccaggacggagggcatc
atcccggcgccggagccgacgcacgcgatcgcggcggcgatcagggaggcgctggagtgc
aagcggaccggggaggagaaggtcatcctgatggccatgtgcggccacggccacttcgac
ctcgccgcgtacgagaagtacctgaggggcgacatggtcgatctctcgcacccggcggag
aagctggaggcctccctcgctgccgtgcccaaagtctga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-SBI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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