KEGG   Shewanella bicestrii: CF168_02655
Entry
CF168_02655       CDS       T05197                                 
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
sbj  Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:sbj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sbj03009]
    CF168_02655
Enzymes [BR:sbj01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     CF168_02655
Ribosome biogenesis [BR:sbj03009]
 Prokaryotic type
  ribosomal protein modification factors
   CF168_02655
SSDB
Motif
Pfam: Radical_SAM TRAM_2 UPF0004 Methyltransf_2 UPF0180 TRAM CLP1_P NTPase_1
Other DBs
NCBI-ProteinID: ASK67844
UniProt: A0A220UHX0
Position
complement(578343..579767)
AA seq 474 aa
MTVETFNPKQTTTLETPAKTLEAASADSTATGNRIGFVSLGCPKNLVDSERILTQLRIDG
YEVTNSYDNADLVIVNTCGFIDAAVEESLDAVREALEENGKVIVTGCLGAKENQIREVHP
DVLEITGPHSYEAVLKHVHKYVPKPEHNPFTSLIPQTGVKLTPKHYAYLKISEGCDNRCT
FCIIPALRGDLDSRPAGSVLDEAKRLVESGVQEILVVSQDTSAYGKDKGGRTDFWNGMPV
KQDITSLARQLGKMGAWVRLHYIYPYPWVDDLIPLMAEGLILPYLDIPMQHASPRILKMM
KRPGRVDRQLEAIQRWREICPDLVIRSTFIVGFPGETEEDFEMLLDFLREARLDRVGCFK
YSEVEGAVANTIAELISEDVKEDRYHRFMEVQAEISAVRLARFVGRTMDILIDDVDEEGA
IGRSFADAPEIDGMVFINGETELEPGMLVRAVITHSDEHDLWAELVDAEDDIEA
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgacagttgaaacttttaatcctaagcaaacaaccacgcttgagaccccagccaagaca
ttagaagcagcgagtgctgattctactgctaccgggaatcgcatcggtttcgtgtctttg
ggttgcccaaaaaacctagtggactcagagcgcattctgacccaattacgcatcgacggc
tatgaagtcaccaacagctacgacaatgccgatctggtaatcgtcaacacctgtggcttt
atcgatgcggcggttgaagaatccttagatgcggtgcgcgaagccctagaagaaaacggc
aaagtgatcgtgaccggctgtttaggcgccaaggaaaaccaaatccgtgaagtgcaccca
gacgtgctcgaaatcacgggtccacacagctacgaagccgtgttaaagcatgtacacaag
tacgtgccaaaaccagagcacaacccatttacctcattaatcccacaaactggggttaag
ttaacgcctaagcattatgcttatttaaagatttcagaaggttgtgataaccgttgtact
ttctgcatcatcccagcactgcgtggcgatttagacagccgcccagcgggtagcgtatta
gatgaagccaagcgcttagttgaatcgggcgtgcaagaaattttagtcgtaagccaagac
acctctgcctacggtaaagacaagggcggccgcaccgatttctggaacggtatgccagtg
aagcaagacatcactagccttgctcgccaactgggcaagatgggcgcttgggtacgttta
cactacatctacccatacccatgggtagacgatctgatccccttgatggccgaaggttta
atcctgccatacctagatattccaatgcagcacgccagcccacgcatcctgaagatgatg
aagcgtccaggccgtgttgaccgtcagttagaagccatccaacgctggcgcgaaatctgc
ccagacttggtgatccgctcaaccttcatcgtgggcttccctggcgaaaccgaagaagat
ttcgaaatgctactcgacttcctgcgtgaagcgcgcctcgaccgcgtaggctgcttcaag
tactcagaagtggaaggtgctgtagccaacactatcgctgaacttatcagcgaagatgtg
aaggaagacagataccacagatttatggaagtccaagccgagatcagcgccgtgcgttta
gcccgtttcgttggccgcactatggatattctgatcgatgacgttgacgaagaaggtgcc
attggccgcagcttcgccgatgctccagaaatcgacggcatggtctttatcaacggtgaa
accgaactcgaacccggcatgttagtgcgtgctgtaatcactcactcggacgagcacgat
ctgtgggccgagttagtcgacgcagaagatgatatcgaggcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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