KEGG   Shewanella bicestrii: CF168_08685
Entry
CF168_08685       CDS       T05197                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
sbj  Shewanella bicestrii
Pathway
sbj03030  DNA replication
sbj03430  Mismatch repair
sbj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sbj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CF168_08685
   03430 Mismatch repair
    CF168_08685
   03440 Homologous recombination
    CF168_08685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbj03032]
    CF168_08685
   03400 DNA repair and recombination proteins [BR:sbj03400]
    CF168_08685
Enzymes [BR:sbj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CF168_08685
DNA replication proteins [BR:sbj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CF168_08685
DNA repair and recombination proteins [BR:sbj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CF168_08685
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA AAA_22 RuvB_N AAA_5 DNA_pol3_delta AAA_16 AAA_14 PIF1 TsaE ResIII AAA_18 AAA_19 AAA_2 AAA_assoc_2 AAA_7 Adeno_E1B_55K_N nSTAND3
Other DBs
NCBI-ProteinID: ASK68949
UniProt: A0A220ULC7
Position
1973040..1976186
AA seq 1048 aa
MSYQVLARKWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAK
GLNCEKGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLLVTVLSRCLQFNLKSLTQ
QEIGTQLQHILTQEQLPFEHEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLNQVQSM
LGSIDEQHVLRLLKALTDADIGVLMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPA
AAQQSLYSAQIQAFAEQLAPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFVPE
KPVKRWQVEDAAKVNLPAQQSMSATPAPNMPAAELAVNQAVAEKKTPLTAERDSQALPQA
AISESMAQSQESSAFQAEVAEQAVSEDALVDEDALDEESTLNAALIAEQQVILSQAQSQG
FGASTETVSRTEAVLISESSPESNSVSTPASNLYAEHNQAAMVDPESSGQKPSPAVLTEP
VALSYDDIEENTQASVSQSADALAPDEYSAEDFGQYDYAAAPLDAYQDDYSQFIAEEQGG
FSGMEDSSLMSDSAQSIDHTDVVHESAADPKSPSFADNSASTTPPAPTTTVSLEDDDILS
AVLAARDSLLSDLDALSTKEGDGKKPAAEVKLKTPGQSAHTAPVSNTTSHNTSSVDASIE
PQVAKNASDNDFELPFDDDFEAELHLESQSNVTPNLRLDPNDRPPWEEAPVAAMDEANAP
AASVNLQTEPPVASQTVVEDLGTAPVAAQTSPTDNEATRVAQALEQAAVQESEPATQSLE
PNTPQQPQAQELTQPKTQPQTQQLIQQSIQQLTQQPASVQSPSSETVSPASSTALTLAQS
ITGHPLDLHWYKLMASLEIGGRVRQLAVNSICQLQANPLPLLLKPDQKHLAAPVAIEQLE
QALTAALGNPRQVEVVIGSDPSRETPLEMRKRFHQELLQQARQSLMMDDNVQWLINRFGA
ELDQDTLLYPPELLAQRSGLIPALPEPE
NT seq 3147 nt   +upstreamnt  +downstreamnt
atgtcatatcaggtgttagccagaaaatggcgccctgccacattcgaacagatggtcggc
caaagccacgtgttgcacgcgctcacgaatgcgttaacacaacaacgtttacaccatgct
tatctttttacgggtacacgcggtgtgggcaagaccagtttggcgcgcctgttcgccaaa
ggcctcaactgtgaaaagggcgtaacggcttccccctgtggcgtgtgtggcagctgtgtc
gaaattgcccaaggccgctttgttgacttgatcgaagtcgatgccgcctcgcgcactaaa
gtcgatgacacccgtgaactcttagataatgtgcaatatcgtccgacccgtggccgtttt
aaggtctacctgattgacgaagtgcacatgctctcccgcagcagttttaatgcgctgcta
aaaaccctcgaagaaccgccagagcatgtgaaatttttactggcgacgaccgatccgcaa
aagctgctggtgactgtgttatcccgctgccttcaatttaatttaaagagcttaacccag
caggaaattggcactcagctacagcatattttaacccaagagcaattaccctttgagcac
gaagccttaactctgctcgccaaagcggccaatggcagtatgcgtgatgccttaagtttg
accgatcaggccattgcctttggtggtggcacggtaatgctcaaccaagtgcaatctatg
ctgggcagcatcgatgagcagcatgtgctgcgcttactcaaagccttaaccgatgccgat
attggcgttttaatgcaaagctgcgcacaggtgctcgcctatggtgcggacgcccaagaa
gtgctgcgcagtttactggaattattgcatcaaattaccctgacgcaatttgcacctgcc
gccgcgcagcaatccctttatagcgcgcaaattcaggcttttgccgagcagttagcgccg
gaacaagtgcagctgtattaccagattttactgactggccgtaaagacttaccccatgcg
ccggatcctaaatcgggtctcgaaatggcgttgctccgagcggtggcatttgttcccgaa
aagcccgtgaaacgttggcaggttgaagacgctgctaaggtgaacttgccagctcagcag
tcaatgtctgcgacgcccgcaccaaatatgcccgcggcggaactagcagtaaatcaagca
gtggctgaaaaaaaaactccgctaaccgcagagcgtgactcacaggctctgccacaagcg
gcaatctctgagtctatggctcaatctcaggaatcttcagcttttcaagccgaagtcgca
gagcaagctgtatccgaggatgctttagttgacgaggatgcacttgatgaagaatctaca
ctcaacgcggcattgattgccgagcagcaagtgatcttaagtcaagcccaaagccaaggc
tttggcgcaagtaccgagacggtatcgcgtactgaggccgtcttaatttcagaatcaagc
cctgaatcgaactcagtatctacgcctgcatcgaatctttatgctgagcataatcaagcg
gcgatggtggatcccgaaagctctggccagaaaccttctcctgcggtgttaacagaaccc
gttgccttatcttatgatgatatcgaggaaaatactcaagcgagtgttagtcagagtgca
gatgcgctagcgccagatgaatattctgcagaggatttcggacaatacgattatgccgcc
gcgccgctcgatgcctatcaggatgattattcgcaatttatagctgaggagcagggcggg
ttctctggcatggaagatagctccttgatgagcgacagtgctcagtctatcgaccacacg
gatgttgtgcatgagtccgccgctgaccccaaatcgccgtcttttgccgacaattcagct
tcaacaactcctccggctccaactactaccgtgtccctcgaggatgacgatattttatcg
gcggttttagcggcgcgtgactccttgttatccgatcttgatgcgctcagcaccaaggaa
ggtgatggaaaaaagccagcagcggaagttaagcttaaaactccgggtcagagtgcacat
accgcgccagtttctaacacgacttcacataacacgtcctcagttgatgcatctatcgag
ccgcaagtcgctaaaaacgcgtctgataacgactttgagctgccctttgacgatgatttc
gaggccgagctccatcttgagtcacagtcaaatgttacgccaaatctgcggcttgatccg
aacgatcgcccgccttgggaagaggcgcccgtcgcggcaatggatgaggccaatgcgcct
gctgcaagtgttaatttacagactgaaccccctgtcgcatcgcaaacagttgttgaggat
ttaggcactgcgcccgttgcagctcaaacatcgccaacggataacgaggcgacacgggtt
gcacaagcgttagagcaagcggctgtacaagaaagcgagcctgcgacgcaaagccttgag
ccgaatacgccgcagcagcctcaggcgcaggaacttacacaaccaaaaactcaaccacaa
actcagcagctaattcagcaatcgattcagcagttaactcagcaaccggcatcggtgcag
tcaccgtcaagcgagacggtttctcctgcgtcatccacagcattaacattggcgcaatcg
attaccggtcatcccttagacttgcactggtataagcttatggcgagcctagagattggc
ggccgtgtgcgtcagttggcggtaaactcgatttgtcagctgcaggctaaccctttgccg
ttgctgcttaaacccgaccaaaaacacttggcggcgcccgtggcgattgagcagctcgag
caggcattgacagccgcattggggaacccgaggcaggttgaggtggtcataggaagcgat
ccttcgcgggaaacgcccttagagatgcgcaaacgttttcaccaagagctactgcaacag
gcacgtcaatcgctaatgatggacgataatgtgcaatggctgattaaccgttttggcgcc
gagctggatcaggataccttactttatcctccagaattgttagctcagcgtagtgggctc
attcccgcgctgcctgagcccgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system