KEGG T00571: Shew185

Shewanella baltica OS185: Shew185_2508

Entry

Shew185_2508 CDS T00571

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

sbm Shewanella baltica OS185

Pathway

sbm00020	Citrate cycle (TCA cycle)
sbm00310	Lysine degradation
sbm00380	Tryptophan metabolism
sbm01100	Metabolic pathways
sbm01110	Biosynthesis of secondary metabolites
sbm01120	Microbial metabolism in diverse environments

Module

sbm_M00009	Citrate cycle (TCA cycle, Krebs cycle)
sbm_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sbm00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:sbm00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:sbm00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2994140..2996971)

AA seq 943 aa
MHQGIMKAWLESSHLSGANSTYVEEMYEAYQEDPQSVADDWRAVFDNLPPVNGASVDAPE
AAHSKVRDYFRSLALEGRHKSSARVTDPEMDAKQVKVLQLINAHRFRGHQGANLDPLELW
KREPVADLDPAFHGLTKEDMDREFNTGSFAHGGETMKLADLVKALKATYCGSIGAEYMHI
TDTDEKRWIQQRLEPSLGKANYDKSVKTRILEGLNAAEGIEKYLGAKFPGAKRFSLEGGD
ALVPMMREIIYRAGEAGTKEIVVGMAHRGRLNVLVNVLGKRPAELFDEFAGKHADTHGSG
DVKYHQGFSSDFETPGGNVHLALAFNPSHLEIVNPVVIGSVRARQDRRGCKDGLQVMPIT
IHGDSAIAGQGIVQETFNMSQTRGFTVGGSIRIVVNNQVGFTTSNHADTRSTEYCTDIAK
MVQAPIFHVNSDDPEAVAFVSQLAVDYRNEFKRDVVVELVCYRRHGHNEADEPSATQPLM
YAKIKKHPTPRKIYADKLIAENVMAADDVTGLINNYRDALDQGDCVVKEWRPMTLHSVDW
TPYIGREWDEAYQASMSAERLQSLADKMSYVPESHPLQSRVAKIYSDRLAMAKGEKPLDW
GFAETLAYASILEDNKRVRITGQDSGRGTFFHRHAVLHNQNDGTTYMPLRNIADEQGPVD
ITDSVLSEASVLAFEYGYATAEPGGLTIWEAQFGDFANCAQVVIDQFLSSGEQKWGRLCG
LTMLLPHGYEGQGPEHSSARLERFLQMCANHNMQVCVPSTPAQVYHMLRRQVVRPMRRPL
IVMSPKSLLRHPLAVSSLDDLASGSFQNVIGEIDTLEASKVDRVVFCSGKVYFELLEKRR
RENITNVALIRVEQLYPFPHDEMIVALADYQHVKDFVWCQEEPQNQGAWYSSQHHFWAAV
PAGAQLTYAGREASAAPACGYPELHAHQQESLVNSALKLTITL

NT seq 2832 nt +upstreamnt +downstreamnt
atgcaccaaggcatcatgaaagcctggctcgaatcatctcacttaagtggtgcaaattcg
acctacgtagaagagatgtatgaagcctatcaagaagacccacagtcagtcgctgatgat
tggcgtgcggtatttgataatctccctcctgtgaacggtgcctctgttgatgcgcctgaa
gctgctcactcaaaagtacgtgattattttcgcagtttagcgttagaaggacgccataag
agctctgctcgtgtgacggatcctgaaatggatgctaagcaagttaaagtcctgcagtta
attaacgcccatcgtttccgtggccatcaaggtgctaaccttgatccgcttgaactgtgg
aaacgcgaacccgttgctgatttagatcctgccttccacggcctgactaaagaagacatg
gatcgtgagtttaatacaggttcttttgctcatggtggcgaaaccatgaagctcgcggat
ttggtaaaagcgctgaaagccacctactgtggttctatcggtgctgaatatatgcacatc
accgataccgatgagaaacgctggatccaacaacgtctcgaaccttccttaggtaaagct
aactacgataaaagtgttaagacacgcattcttgaaggcttaaacgccgcagaaggcatt
gaaaaatacttaggtgctaaattccctggtgcgaaacgtttctcgttagaaggcggcgat
gcgttagtgcctatgatgcgcgaaattatttatcgtgcaggtgaagcgggtactaaagaa
atcgtcgttggtatggctcaccgtggtcgtctgaacgtgttagtgaacgtattgggtaag
cgtcctgctgaactgtttgacgagttcgcgggtaagcatgctgatacccacggttcgggt
gacgttaagtaccaccaaggtttctcctctgatttcgaaacgccgggcggcaatgtgcat
ttagcactggcctttaacccatcgcaccttgaaatcgttaaccctgtggtgattggttct
gtacgtgctcgtcaagaccgtcgtggttgtaaggatggcttacaagtcatgcctattact
attcacggtgactcagccattgcaggtcaagggatagtacaagagacattcaacatgtct
caaactcgcggttttaccgtcggcggcagcattcgcatcgtagtgaacaaccaagtgggt
ttcactacgtctaaccatgcggacactcgctcgactgaatactgtactgacatcgctaag
atggttcaggcaccgattttccacgttaactctgatgatccagaagccgttgcttttgtg
tcgcagttagccgttgattatcgtaacgagttcaaacgtgatgtggtggttgaattagtc
tgttatcgccgtcatggccataacgaagccgatgagccaagtgcaactcagccgctgatg
tatgccaagatcaagaaacacccaacgccacgtaagatttatgcagataagctaatcgct
gaaaacgtgatggctgctgatgatgtgactggtcttatcaataattaccgtgatgcatta
gatcaaggtgattgtgtggtgaaagaatggcgcccaatgacgctgcattctgttgactgg
acaccgtatatcggtcgtgagtgggacgaagcttatcaggcatctatgtcggctgagcgt
ttacaaagtcttgctgacaaaatgagttatgtgcctgaaagccatccattgcaatcacgc
gtagctaagatttatagcgaccgtttagcgatggcgaaaggcgagaaaccactcgattgg
ggctttgcagaaaccttggcttatgcctcgattctggaagacaacaagcgtgtacgtatt
acgggtcaagattctggccgtggcactttcttccatcgtcatgcggtattgcacaatcaa
aacgatggcacgacttacatgccactgcgcaacatcgccgatgagcaaggcccagttgat
attactgactcagtattatctgaagcctcagtgctggcatttgagtatggttatgcgaca
gcagaacccggcggcctgaccatttgggaagcgcagtttggtgactttgctaactgtgct
caagtggttatcgaccagttcttgtcatcgggtgagcagaagtggggccgtttatgtggt
ctgactatgctgttaccccatggctatgaaggtcaaggccctgagcattcaagcgcccgt
ttagagcgtttcttgcaaatgtgtgctaaccacaacatgcaagtgtgtgtgccatctacg
ccggcacaggtttaccatatgttgcgccgtcaagtggtgcgtcctatgcgtcgaccactc
atcgttatgtcgcctaaatcattgctacgtcatccattagcggtttcaagcttggacgat
ttagccagtggtagtttccaaaacgtgatcggtgaaatcgatacgttggaagcgagcaag
gttgaccgcgttgtcttctgtagtggcaaagtgtacttcgagctactggaaaaacgtcgt
agagaaaatatcactaacgtagcgttaatccgtgtcgaacagttatatccgttcccacat
gatgaaatgatcgttgctttggctgattaccaacatgttaaagattttgtttggtgtcag
gaagagccacagaaccaaggtgcttggtactctagtcaacaccatttctgggccgcggtt
cctgcaggtgcacagttaacttatgccggtcgtgaagcgtcagctgcaccagcatgtggt
taccctgagttgcacgcacatcagcaagaatctttagtgaacagtgccctgaaacttaca
atcacactgtag

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SBM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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