KEGG T00301: SBO

Shigella boydii Sb227: SBO_0584

Entry

SBO_0584 CDS T00301

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

sbo Shigella boydii Sb227

Pathway

sbo00020	Citrate cycle (TCA cycle)
sbo00310	Lysine degradation
sbo00380	Tryptophan metabolism
sbo01100	Metabolic pathways
sbo01110	Biosynthesis of secondary metabolites
sbo01120	Microbial metabolism in diverse environments

Module

sbo_M00009	Citrate cycle (TCA cycle, Krebs cycle)
sbo_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sbo00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:sbo00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:sbo00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

ShiBASE_China:

UniProt:

Position

602520..605321

AA seq 933 aa
MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHS
QTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKV
ADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEE
KRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLK
EMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMG
FSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAV
TGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIF
HVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKH
PTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHE
WDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYSDRQAMAAGEKLFDWGGAENLA
YATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLS
EEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPH
GYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKS
LLRHPLAVSSLEELANGTFLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDV
AIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLR
YAGRPASASPAVGYMSVHQKQQQDLVNDALNVE

NT seq 2802 nt +upstreamnt +downstreamnt
atgcagaacagcgctttgaaagcctggttggactcttcttacctctctggcgcaaaccag
agctggatagaacagctctatgaagacttcttaaccgatcctgactcggttgacgctaac
tggcgttcgacgttccagcagttacctggtacgggagtcaaaccggatcaattccactct
caaacgcgtgaatatttccgccgcctggcgaaagacgcttcacgttactcttcaacgatc
tccgaccctgacaccaatgtgaagcaggttaaagtcctgcagctcattaacgcataccgc
ttccgtggtcaccagcatgcgaatctcgatccgctgggactgtggcagcaagataaagtg
gccgatctggatccgtctttccacgatctgaccgaagcagacttccaggaaaccttcaac
gtcggttcatttgccagcggcaaagaaaccatgaaactcggcgagctgctggaagccctc
aagcaaacctactgcggcccgattggtgccgagtatatgcacatcaccagcaccgaagaa
aaacgctggatccaacagcgtatcgagtctggtcgcgcgactttcaatagcgaagagaaa
aaacgcttcttaagcgaactgaccgccgctgaaggccttgaacgttacctcggcgcaaaa
ttccctggcgcaaaacgcttctcgctggaaggcggtgacgcgttaatcccgatgcttaaa
gagatgatccgccacgctggcaacagcggcacccgcgaagtggttctcgggatggcgcac
cgtggtcgtctgaacgtgctggtgaacgtgctgggtaaaaaaccgcaagacttgttcgac
gagttcgccggtaaacataaagaacacctcggcacgggtgacgtgaaataccacatgggc
ttctcgtctgacttccagaccgatggcggcctggtgcacctggcgctggcgtttaacccg
tctcaccttgagattgtaagcccggtagttatcggttctgttcgtgcccgtctggacaga
cttgatgagccgagcagcaacaaagtgctgccaatcaccatccacggtgacgccgcagtg
accgggcagggcgtggttcaggaaaccctgaacatgtcgaaagcgcgtggttatgaagtt
ggcggtacggtacgtatcgttatcaacaaccaggttggtttcaccacctctaatccgctg
gatgcccgttctacgccgtactgtactgatatcggtaagatggttcaggccccgattttc
cacgttaacgcggacgatccggaagccgttgcctttgtgacccgtctggcgctcgatttc
cgtaacacctttaaacgtgatgtcttcatcgacctggtgtgctaccgccgtcacggccac
aacgaagccgacgagccgagcgcaacccagccgctgatgtatcagaaaatcaaaaaacat
ccgacaccgcgcaaaatctacgctgacaagctggagcaggaaaaagtggcgacgctggaa
gatgccaccgagatggttaacctgtaccgcgatgcgctggatgctggcgattgcgtagtg
gcagagtggcgtccgatgaacatgcactctttcacctggtcgccgtacctcaaccacgaa
tgggacgaagagtacccgaacaaagttgagatgaagcgcctgcaggagctggcgaaacgc
atcagcacggtgccggaagcagttgaaatgcagtctcgcgttgccaagatttatagcgat
cgccaggcgatggctgccggtgagaaactgttcgactggggcggtgcggaaaacctcgct
tacgccacgctggttgacgaaggcattccggttcgcctgtcgggtgaagactccggtcgc
ggtaccttcttccaccgccacgcggtgatccacaaccagtctaacggttccacttacacg
ccgctgcaacacatccataacgggcagggcgcgttccgcgtctgggactccgtactgtct
gaagaagcagtgctggcgtttgaatacggttatgccaccgcagaaccacgcactctgacc
atctgggaagcgcagttcggtgacttcgctaacggtgctcaggtggttatcgaccagttc
atctcctctggcgaacagaaatggggccggatgtgtggtctggtgatgttgctgccgcac
ggttatgaagggcaggggccggagcactcctccgcgcgtctggaacgttatctgcaactt
tgtgctgagcaaaacatgcaggtgtgcgtaccgtctaccccggcacaggtttaccacatg
ctgcgtcgtcaggcgctgcgcgggatgcgtcgtccgctggtcgtgatgtcgccgaaatcc
ctgctgcgtcatccgctggcggtttccagcctcgaagaactggcgaacggcaccttcctg
ccagccatcggtgaaatcgacgagcttgatccgaagggcgtgaagcgcgtagtgatgtgt
tctggtaaggtttattacgacctgctggaacagcgtcgtaagaacaatcaacacgatgtc
gccattgtgcgtatcgagcaactctacccgttcccgcataaagcgatgcaggaagtgttg
cagcagtttgctcacgtcaaggattttgtctggtgccaggaagagccgctcaaccagggc
gcatggtactgcagccagcatcatttccgtgaagtgattccgtttggggcttctctgcgt
tatgcaggccgcccggcctccgcctctccggcggtagggtatatgtccgttcaccagaaa
cagcaacaagatctggttaatgacgcgctgaacgtcgaataa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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