KEGG T00301: SBO

Shigella boydii Sb227: SBO_1954

Entry

SBO_1954 CDS T00301

Gene name

ycfO

Definition

beta-hexosaminidase (EC:3.2.1.52)

Orthology

K01207

beta-N-acetylhexosaminidase [EC:3.2.1.52]

Organism

sbo Shigella boydii Sb227

Pathway

sbo00520	Amino sugar and nucleotide sugar metabolism
sbo01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:sbo00520]

SSDB

Motif

Pfam:

Glyco_hydro_3

Other DBs

NCBI-GI:

NCBI-GeneID:

ShiBASE_China:

UniProt:

Position

complement(1929436..1930461)

AA seq 341 aa
MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRELVRQIRAASRNHLVVA
VDQEGGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAQEAGWLMASEMIAMDIDISFAPV
LDVGHISAAIGERSYHADPEKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETP
CDPRPQAEIRAKDMSVFSTLIRENKLDAIMPAHVIYSDVDPRPASGSSYWLKTVLRQELC
FDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRKGAVSVLDNLSPIKAERV
TRLYHKGSFSRQELMDSARWKASSTRLNQLHERWQEEKAGH

NT seq 1026 nt +upstreamnt +downstreamnt
gtgggtccagtaatgttggatgtcgaaggttatgaactggacgcggaagagcgtgaaata
ctggcgcatccgctggtgggagggctgattctctttacgcgtaactatcatgatcctgcc
cagttacgtgaactggtgcgccagatccgcgcagcatcgcgcaatcatctggtggtggcg
gtagatcaggaaggtggacgcgtgcagcgttttcgcgaaggttttacccgcttaccggca
gcacaatcctttgctgcgctgttgggaatggaagagggcggcaaactggcgcaagaggcg
ggttggctgatggccagcgaaatgatcgctatggatattgatatcagctttgcgccagtg
ctggatgtaggacatatcagcgcggcgattggcgagcgttcttatcatgccgacccagaa
aaagccctggcaatcgctagtcggtttattgatgggatgcatgaagccggaatgaaaacg
accgggaaacacttcccaggacacggtgcagtaactgcagattcacacaaagagacgccg
tgcgacccacgcccgcaagcggaaattcgtgccaaagatatgtcggttttcagcacgtta
atccgcgaaaataaactcgacgccattatgcctgcgcatgtgatctacagtgatgttgat
ccgcgtccggcgagcggttcttcttactggctgaaaaccgttttgcgtcaggaactgtgt
tttgacggtgtaattttctctgacgatttatcgatggaaggtgccgcgattatgggcagt
tatgccgaacgcgggcaggcatcactggacgcaggttgcgatatgatcctggtctgcaat
aatcgtaaaggggccgtcagcgtgttagataatctgtcaccgatcaaggcagaacgtgtt
acacgtttgtatcataaaggttcattttcgcgacaggaactgatggactcggctcgctgg
aaggcgagcagcacccgtctgaatcagttacatgaacgctggcaggaagagaaagcaggt
cactaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

Download RDF

DBGET integrated database retrieval system