KEGG   Shigella boydii Sb227 (serotype 4): SBO_2586
Entry
SBO_2586          CDS       T00301                                 
Symbol
yfhD
Name
(GenBank) putative periplasmic binding transport protein
  KO
K18691  peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
Organism
sbo  Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:sbo00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sbo01011]
    SBO_2586 (yfhD)
Enzymes [BR:sbo01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.29  peptidoglycan lytic transglycosylase
     SBO_2586 (yfhD)
Peptidoglycan biosynthesis and degradation proteins [BR:sbo01011]
 Peptidoglycan biosynthesis and degradation
  Lytic transglycosylase
   SBO_2586 (yfhD)
SSDB
Motif
Pfam: SBP_bac_3 SLT Lysozyme_like
Other DBs
NCBI-ProteinID: ABB67129
ShiBASE_China: SBO2586
UniProt: Q31XS9
Position
2593018..2594436
AA seq 472 aa
MSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLA
AGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLCNLTAEQLTVAPGHVVVNDLQT
LKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDE
QPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDA
VLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDR
TDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHMLDARALTAKTKGNPD
SWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAA
MQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLFSRKGSEEKQN
NT seq 1419 nt   +upstreamnt  +downstreamnt
gtgagcaccattcatactcccctgacttataacgaaatcaacgggaaaccttttggcctg
gattacgaactggcgaaacagtttgccgattacctcggcgtaaaactgaaagtgaccgtg
cggcagaatatcagccagctgtttgacgaccttgataatggtaacgccgacctgctggcg
gcaggactggtctataacagtgagcgggtaaaaaattatcagcctggccctacctattat
tccgtgtcacaacaactggtttataaagtgggtcagtatcgcccacgtacgctgtgcaac
ctgacggcggagcaactcaccgttgcaccgggtcatgtggtggttaacgatctccagacc
ctgaaagaaacaaaattcccggaattaagctggaaggtagacgacaaaaaaggctctgcg
gaattaatggaagatgtcatcgaaggaaaactcgattacaccattgctgattctgtcgcc
atcagcctgtttcagcgcgttcacccggagctcgccgtagcgctcgatatcaccgatgaa
caaccggtgacttggtttagcccgttagatggcgataataccctttccgccgccctgctc
gacttcttcaacgaaatgaatgaagacggtacgctggcacgcattgaagagaaatacctg
gggcatggcgatgattttgattacgtcgatacgcgcacatttttacgcgccgtcgatgcg
gtactgccgcagttaaagcccctgtttgagaaatacgccgaagaaattgactggcgtttg
ctggccgctattgcttatcaggaatcgcactgggatgcacaggccacttcaccgacgggt
gtgcgcggcatgatgatgttaaccaaaaataccgcgcaaagcctcggcattacggatcgt
accgatgccgaacagagcatcagcggtggcgtgcgttatttgcaggatatgatgagtaaa
gtgccggaaagtgtgccggagaacgagcggatctggtttgccctcgctgcgtacaatatg
ggctatgcgcatatgctggatgcccgcgccctgacggcaaaaaccaaagggaatcctgac
agttgggctgacgtaaaacagcgtctgcctttacttagccagaaaccctattacagcaag
ctgacttacggctacgctcgtggacatgaagcctacgcttatgtcgaaaatattcgtaag
tatcaaattagcctggtgggttatctgcaagagaaagagaagcaggctacagaagcggcg
atgcaactggcgcaggattatccggcggtatcgcctacggagttgggcaaagagaaattt
ccttttctctcgtttctttcccagtcgtcatcaaactatttgacccattctccctctctg
ctgttttccaggaaagggagtgaagagaaacaaaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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