KEGG T00301: SBO

Shigella boydii Sb227: SBO_3618

Entry

SBO_3618 CDS T00301

Gene name

yibO

Definition

phosphoglyceromutase (EC:5.4.2.1)

Orthology

K15633

2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1]

Organism

sbo Shigella boydii Sb227

Pathway

sbo00010	Glycolysis / Gluconeogenesis
sbo00260	Glycine, serine and threonine metabolism
sbo00680	Methane metabolism
sbo01100	Metabolic pathways
sbo01110	Biosynthesis of secondary metabolites
sbo01120	Microbial metabolism in diverse environments
sbo01230	Biosynthesis of amino acids

Module

sbo_M00001	Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
sbo_M00002	Glycolysis, core module involving three-carbon compounds

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:sbo00010]
Metabolism; Energy metabolism; Methane metabolism [PATH:sbo00680]
Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:sbo00260]

SSDB

Motif

Pfam:

Metalloenzyme iPGM_N Phosphodiest Sulfatase PIG-L

Other DBs

NCBI-GI:

NCBI-GeneID:

ShiBASE_China:

UniProt:

Position

3634045..3635589

AA seq 514 aa
MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHTLIDASGLEVGLPDRQ
MGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAVHIMGLLS
AGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAESSLKKFEEKFAALGKGR
VASIIGRYYAMDRDNRWDRVEKAYDLLTLAQGEFQADTAVAGLQAAYARDENDEFVKATV
IRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNVDFVMLTEYAA
DIKTAVAYPPASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKGEDRILI
NSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEA
LDHCVEEVAKAVESVGGQLLITADHGNAEQMRDPATGQAHTAHTNLPVPLIYVGDKNVKA
VAGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE

NT seq 1545 nt +upstreamnt +downstreamnt
atgtcggtttctaaaaaacctatggtactggtgattctggatggctatggctatcgtgaa
gaacagcaggataacgccatttttagtgctaaaaccccggtaatggatgcactgtgggcc
aatcgtccgcataccctgatcgacgcttccggtctggaagtcggtctgcctgaccgtcag
atgggtaactccgaagtaggccacgttaacctgggtgccggccgcatcgtgtatcaggac
ctgactcgtctggacgttgaaatcaaagatcgcgctttctttgctaatccagtgctgact
ggcgcggtagataaagcgaaaaacgcaggtaaagcagtacacattatgggtctgctctcc
gcaggcggcgtacacagccacgaagatcacatcatggcgatggtagaactggcagctgaa
cgcggcgcagaaaaaatctacctgcacgcattccttgacggtcgcgacaccccgccgcgc
agtgctgaatcctcgctgaaaaaatttgaagagaaatttgctgcgctgggtaaaggccgc
gtagcgtccatcattggtcgttactacgcgatggaccgcgataaccgttgggatcgcgtt
gaaaaagcctatgacctgctgactctggcgcagggtgagttccaggccgatactgccgtt
gctggtttgcaggcagcttatgctcgcgacgaaaacgacgagttcgtgaaagcgaccgtt
attcgtgcagaaggtcagccagatgcggcaatggaagacggcgatgcgctgattttcatg
aacttccgtgctgaccgcgcgcgcgaaatcactcgtgcattcgtaaacgcagatttcgac
ggcttcgcgcgtaagaaagtggttaacgtcgatttcgtgatgctgaccgaatacgccgct
gacatcaaaactgcggttgcttacccacccgcttccctggttaacaccttcggcgagtgg
atggcgaaaaacgacaaaactcagttgcgtatttccgaaaccgaaaaatatgcccacgtt
actttcttcttcaacggtggcgtagaagagtcattcaaaggcgaagatcgcattctgatc
aactcaccgaaagtggctacctacgatctgcaaccggaaatgagctccgcagagctgacc
gaaaaactggttgcggccatcaagagcggcaaatacgacaccattatctgtaactatccg
aacggcgacatggtaggtcacaccggggtgatggaagcggcggttaaagcggttgaagca
ctggatcactgcgtggaagaagtcgcgaaagcggttgagtccgtgggtggacaactgctg
atcaccgctgaccacggtaacgctgaacagatgcgcgatccggcaacgggtcaggcacac
acggcacacaccaacctgccagttccgctgatttacgttggtgataagaacgtgaaagcg
gttgcaggcggcaaactttctgacatcgcgccgaccatgttgtcgctgatgggtatggaa
atcccgcaagagatgactggtaagccgctgttcatcgtggaataa

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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