KEGG   Shigella boydii Sb227: SBO_3857Help
Entry
SBO_3857          CDS       S.boydii                               
Gene name fadA
Definition 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
Orthology K00632  acetyl-CoA acyltransferase [EC:2.3.1.16]
Pathway sbo00071  Fatty acid metabolism
sbo00280  Valine, leucine and isoleucine degradation
sbo00281  Geraniol degradation
sbo00362  Benzoate degradation via hydroxylation
sbo00592  alpha-Linolenic acid metabolism
sbo01100  Metabolic pathways
Class Metabolism; Lipid Metabolism; Fatty acid metabolism [PATH:sbo00071]
Metabolism; Lipid Metabolism; alpha-Linolenic acid metabolism
[PATH:sbo00592]
Metabolism; Amino Acid Metabolism; Valine, leucine and isoleucine
degradation [PATH:sbo00280]
Metabolism; Xenobiotics Biodegradation and Metabolism; Ethylbenzene
degradation
Metabolism; Xenobiotics Biodegradation and Metabolism; Benzoate
degradation via hydroxylation [PATH:sbo00362]
Metabolism; Xenobiotics Biodegradation and Metabolism; Geraniol
degradation [PATH:sbo00281]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Pfam: Thiolase_N Thiolase_C ketoacyl-synt ACP_syn_III DUF3649
PROSITE: AA_TRNA_LIGASE_I THIOLASE_1 THIOLASE_2 THIOLASE_3
Motif
Other DBs NCBI-GI: 82546196
NCBI-GeneID: 3782840
ShiBASE_China: SBO3857
UniProt: Q31UE3
Position complement(3880856..3882019) Genome map
AA seq 387 aa AA seqDB search
MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQ
TLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEH
MGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAAT
QSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATLRPAFDPVNGTVTAGTSSA
LSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCNPSIMGYGPVPASKLALKKAGLSAS
DIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLM
ERKDVQFGLATMCIGLGQGIATVFERV
NT seq 1164 nt NT seq  +upstreamnt  +downstreamnt
atggaacaggttgtcattgtcgatgcaattcgcaccccgatgggccgttcgaagggcggt
gcttttcgtaacgtgcgtgcagaagatctctccgctcatttaatgcgtagcctgctggcg
cgtaacccggcgctggaagcggcggccctcgacgatatttactggggttgtgtgcagcag
acgctggagcagggttttaatatcgcccgtaacgcggcgctgctggcagaagtgccgcac
tctgtcccggcggttaccgtcaatcgcttgtgtggttcatccatgcaggcactgcatgac
gcagcacgaatgatcatgactggcgatgcgcaggcatgtctggttggcggcgtggagcat
atgggccatgtgccaatgagtcacggcgtcgattttcaccccggcctgagccgcaatgtc
gccaaagcggcgggcatgatgggcttaacggcagaaatgctggcgcgtatgcacggtatc
agccgtgaaatgcaggatgcctttgccgcgcggtcacacgcccgcgcctgggccgccacg
cagtcgggcgcatttaaaaatgaaatcatcccgaccggtggtcacgatgccgacggcgtc
ctgaagcagtttaattacgacgaggtgattcgaccggaaaccaccgtggaagccctcgcc
acgctgcgtccggcgtttgatccagtaaacggtacggtaacggcgggcacatcttctgca
ctttccgatggcgcagctgccatgctggtgatgagtgaaagccgcgcccatgaattaggt
cttaagccgcgcgctcgtgtgcgttcgatggcggtcgttggttgtaacccatcgattatg
ggttacggcccggttccggcctcgaagctggcgctgaaaaaagcggggctttctgccagc
gatatcggcgtgtttgagatgaacgaagcctttgccgcgcagatcctgccgtgcattaaa
gatctcgggctaatggagcagattgacgagaagatcaacctcaatggtggtgcgatcgcg
ctgggtcatccgctgggctgttccggtgcgcgtatcagcaccacgctgctgaatctgatg
gaacgcaaagacgttcagtttggtctggcgacgatgtgtatcggtctgggtcagggtatt
gcgacggtgtttgagcgggtttaa
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