KEGG T00803: Sbal223

Shewanella baltica OS223: Sbal223_1433

Entry

Sbal223_1433 CDS T00803

Definition

Fis family sigma-54 specific transcriptional regulator

Orthology

K10941

sigma-54 specific transcriptional regulator, flagellar regulatory protein A

Organism

sbp Shewanella baltica OS223

Pathway

sbp02020

Two-component system

Class

Environmental Information Processing; Signal transduction; Two-component system [PATH:sbp02020]

SSDB

Motif

Pfam:

Sigma54_activat FleQ Sigma54_activ_2 HTH_8 AAA_5 AAA_16 Mg_chelatase AAA

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1674489..1675922

AA seq 477 aa
MMQTDQRILLIGPPSERLNRLCCIFDFLGEQIAQIDAEKLSASLQDTRFRALVILTDVMD
ADALKNIAGQHPWQPMLLLGNVDDLQVSNILGNIEEPLTYPQLTELLHFCQVFGQVKRPQ
VPTSANQTKLFRSLVGRSDGIANVRHLINQVATSEATVLVLGQSGTGKEVVARNIHYLSE
RRDGPFIPVNCGAIPPELLESELFGHEKGSFTGAICSRKGRFELAEGGTLFLDEIGDMPL
QMQVKLLRVLQERVFERVGGTKTINADVRVVAATHRDLETMISVNEFREDLYYRLNVFPI
EMPALCDRKDDVPLLLQELVSRVYNEGRGKVRFTQRAIESLKEHAWSGNVRELSNLVERL
TILYPGGLVDVNDLPVKYRHIDVPEYCVEMSEEQQERDALASIFSDEEPVEIPETRFPSE
LPPEGVNLKDLLAELEIDMIRQALELQDNVVARAAEMLGIRRTTLVEKMRKYGMTKD

NT seq 1434 nt +upstreamnt +downstreamnt
atgatgcaaacagatcaacgaattttacttatcggccccccatcagagcgattaaatcgc
ctgtgttgcatttttgattttttaggtgagcaaattgcacaaattgacgccgaaaaatta
agtgctagcctccaagatactcgttttcgagctttagttatcctaactgatgttatggat
gctgatgcgcttaaaaacatcgcgggtcaacatccatggcaacctatgctgttgcttggc
aacgttgacgatctgcaagtgtctaacattcttggaaatattgaggaacctttaacctat
cctcaactcaccgaattattacacttctgccaagtatttggccaagttaagcgtcctcaa
gtccccacaagtgcaaatcaaactaagttgttccgaagcttggttgggcgcagtgatggt
attgccaatgtaagacacttgattaatcaagtggcgacatctgaggcgactgtactagta
ctgggccaatccggtacaggtaaagaagtggtcgcccgtaatatccattatttgtctgag
cgtcgtgatggcccttttattcctgttaactgtggtgctataccgccagagttattagag
agtgaactttttggtcatgagaagggatcatttactggggctatctgttctcgtaaaggc
cgtttcgaattggcggaaggtggcacactatttctcgatgaaattggtgacatgccattg
cagatgcaagttaaattgcttcgtgtgctgcaagaacgggtatttgagcgtgttggcggc
actaagaccatcaatgccgatgtgcgcgttgtcgcagcgacacatagagatttagaaacc
atgatcagcgtgaatgagttccgcgaggatctctattaccgcctaaacgtattcccgatt
gaaatgcctgcgctatgtgatcgcaaggacgatgtgcctttgctgttacaagagttggtt
agccgagtctacaacgaaggccgtggtaaggtgcgttttacgcagcgtgcgatagagtcg
ctgaaagaacatgcttggtcgggcaacgtgcgggagctgtctaacttagtcgaacgcctc
actatcctatatccgggtggactggttgatgttaacgacttacccgttaagtatcgccat
atcgatgtgcccgaatattgtgtagagatgagcgaagagcaacaggaacgtgatgctttg
gcttctatctttagtgatgaagagccggttgaaatccctgagacgcgtttcccaagtgag
ctaccacctgaaggcgtgaaccttaaggatttattagcagaactggaaatcgacatgata
cgtcaggcgctagagctgcaagataacgttgttgctcgcgcggctgagatgctaggaata
cgtcgtacaacgctagtggaaaaaatgcgtaagtacggaatgaccaaagactag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SBP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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