KEGG   Shewanella baltica OS223: Sbal223_1713
Entry
Sbal223_1713      CDS       T00803                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sbp  Shewanella baltica OS223
Pathway
sbp03030  DNA replication
sbp03430  Mismatch repair
sbp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sbp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sbal223_1713
   03430 Mismatch repair
    Sbal223_1713
   03440 Homologous recombination
    Sbal223_1713
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbp03032]
    Sbal223_1713
   03400 DNA repair and recombination proteins [BR:sbp03400]
    Sbal223_1713
Enzymes [BR:sbp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Sbal223_1713
DNA replication proteins [BR:sbp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Sbal223_1713
DNA repair and recombination proteins [BR:sbp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Sbal223_1713
SSDB
Motif
Pfam: RNase_T CAF1 RNase_H_2
Other DBs
NCBI-ProteinID: ACK46218
UniProt: B8E4Y3
Position
2010767..2011453
AA seq 228 aa
MNTLLLKTQLNWRALRCQHQLFKGYYQSLLPLLAMPLSEAPLVAMDLEMTGLNPQQDQIL
SIGLVPIERGEIPLARAEQKLVQIRGSVGQSATIHGILDNHLVQAVTIEEAMGWFINQTY
GRVLVAHYAPLDCRFLQQDLLAIYHQALILPAIDTLMLERHRLLREHSVIKEGSLRLGAC
RERYGLPIYTAHSALTDALACGELLLAQMAAMGGAGQLTVADLLRQST
NT seq 687 nt   +upstreamnt  +downstreamnt
atgaatacattgttgctgaaaactcagctcaattggcgggcgctgcgttgccaacatcag
ttatttaagggctattatcaatcgctattacctctgctggcgatgccgttatccgaagcg
cctttggtggcgatggatttagagatgacaggtctcaatccgcagcaagatcaaatcctc
agtattggcttagtgccgattgagcgcggcgagatccctttggcgcgcgccgagcaaaaa
ttagtgcaaattcgtggcagtgtcggccagagcgcgacgatccacgggatcctcgataat
catctggtgcaggcggtgacgattgaggaagccatgggctggtttatcaatcaaacctat
ggtcgggtgctggtcgcgcattatgctccgctagattgtcgctttctgcagcaggattta
ttggcgatttatcatcaagccctcatcctacccgccattgatacactcatgcttgaaagg
catcgtttgctacgggaacactcagtgattaaagagggcagtttgcgccttggcgcttgc
cgcgaacgttacggtttgcccatttatactgcccacagtgcgttgaccgatgccttagct
tgcggggaattattattggcgcaaatggcggccatgggcggggcggggcaacttactgtg
gcagatttattgcggcaatcgacttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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