KEGG   Shewanella baltica OS678: Sbal678_0366
Entry
Sbal678_0366      CDS       T01725                                 
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
sbt  Shewanella baltica OS678
Pathway
sbt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sbt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Sbal678_0366
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbt03021]
    Sbal678_0366
   03400 DNA repair and recombination proteins [BR:sbt03400]
    Sbal678_0366
Enzymes [BR:sbt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Sbal678_0366
Transcription machinery [BR:sbt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Sbal678_0366
DNA repair and recombination proteins [BR:sbt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Sbal678_0366
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ADT92566
Position
complement(406725..407003)
AA seq 92 aa
MARVTVEDAVEQIGNRFDMILVAARRARQIAVQGKDPMVEEMNDKPTVIALREIELGLVN
AHTLDADERQTVREREAAEIAAVSAIAEGRSL
NT seq 279 nt   +upstreamnt  +downstreamnt
atggctcgcgtaactgtagaagacgccgtagaacaaatcggcaaccgttttgatatgatc
ttggttgcggcgcgtcgtgctcgccaaatcgccgtgcagggtaaagaccctatggttgaa
gagatgaacgacaaaccaacggttatcgccctgcgtgaaatcgaactaggtttagttaac
gctcacaccttagatgccgatgagcgtcaaacggtacgtgaacgtgaagccgctgaaatt
gcagcggtttcagctattgctgaaggccgttcattataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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