KEGG   Sphaerochaeta globosa: SpiBuddy_2110
Entry
SpiBuddy_2110     CDS       T01439                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
sbu  Sphaerochaeta globosa
Brite
KEGG Orthology (KO) [BR:sbu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbu03032]
    SpiBuddy_2110
   03400 DNA repair and recombination proteins [BR:sbu03400]
    SpiBuddy_2110
Enzymes [BR:sbu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     SpiBuddy_2110
DNA replication proteins [BR:sbu03032]
 Prokaryotic type
  DNA Topoisomerases
   SpiBuddy_2110
DNA repair and recombination proteins [BR:sbu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SpiBuddy_2110
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Phage_TTP_12
Other DBs
NCBI-ProteinID: ADY13931
UniProt: F0RSY4
Position
complement(2288101..2290644)
AA seq 847 aa
MDNANTLIIVESPTKAKTITKFLPSSCKVVASKGHIRDLPEDRMAIDVEHEFACDYEVVS
GKESLIKELKSSLKKADRLLLATDEDREGESISWHLLEVLKPKIPFQRMVFHEITKSAIT
KALEGGRPLDENLVKAQEGRRIIDRLYGYTLSPTLWKKLSNKKLSAGRVQSVGLRLTVQR
ERERLAFQQSTYFDAKAELLAEQKQHFEAKLTAYQGHRLANSKDFDSISGQYKAKGQVLQ
LSREQAQAIVKELKAEPFRVQDIQRKPFVTRPNIPFTTSTLQQDAIKKLHISASDTMRIA
QKLYENGFITYMRTDSPSLSQEGTQAARSQVDQLYGQEYLSPSARYFAAKSAGAQEAHEA
IRPAGERFLIPSETHLIGKELALYELIWKRTLASQMAEAKKATTTVTLEAGEGTFTATGT
EIVFPGFLRAYVEGSDDPDAALEDKETLLPAMKVGQVCPLASLVEVEHQTKSPARYTEAY
LVQELEKRGIGRPSTYATIIKTLLDRRYAIKEGSALAPTFIGFAVCQFLETNFPQFVDYD
FTSMMEDGLDKIASGELDKIVFLSSFYCGESGLLSQNALQLKQDNKVVSKTLILPHISDK
NPVMIGPYGAYVIDANEAFISLPLSWIPGNITDEDVKTLIANGKEKQQPVTLGSGAVKGE
AVKVMNGRFGPYWQEGEGKDAKRASIPKWVQDANRSEELELANRYLSLPRNLGKDEDGNE
VLAYKGKYGPYIASNNKTRNLKKTDHDQELFSITLKEALALLSQEVEKSGAKGKKGGARS
AKASTVKDLGQFEGEAVSVATGRYGFYLKAGKENIALPDAYKKDEEKALSLTLDEAVEHI
RTKRAKE
NT seq 2544 nt   +upstreamnt  +downstreamnt
atggataatgccaatacattgatcattgttgagtcgcctaccaaggccaagacgataaca
aaattccttccttcctcatgcaaggtagttgcgagcaaaggacatatcagagaccttccc
gaggatcggatggctattgatgtggagcatgagttcgcttgtgactacgaggtggtgtcc
ggcaaggagtcattgatcaaggagttgaaaagcagcttgaagaaagccgatcgactgctg
ctggcaactgatgaggaccgtgaaggagagagtatttcctggcatttacttgaggttctt
aagcccaagattccgttccagcgtatggtttttcacgaaattaccaagagtgcaataacc
aaagccttggaaggtggcagaccgctggatgaaaatctggtcaaggcacaggagggaagg
cgcatcatcgaccgcctgtatgggtatacgctttcgccgactctctggaaaaagttatcc
aataaaaaactctcggcagggcgcgtgcaatcggtcgggttgcgtttgaccgtgcagcgt
gagcgagagcggcttgcgttccagcaaagcacctacttcgatgcaaaagcggagttgctt
gcagagcagaagcagcattttgaagccaagctgacagcctaccaaggtcatcgcctggca
aacagcaaggattttgattcaattagcggccaatacaaggccaaaggccaagtgctccag
ctttctcgggagcaagcccaggctatcgtaaaggaattgaaggcagagccgttcagggtc
caggatatccaacgcaaaccctttgtcacccggcctaacattcccttcaccaccagcacc
cttcagcaggatgctattaagaaactgcatatcagtgcctctgatacgatgcgcattgct
cagaaactctatgagaacggcttcattacctacatgagaaccgacagcccttctctgagt
caggagggaacgcaggccgccagaagtcaggtggaccagttgtacggccaagaataccta
tccccctcggcccgctactttgctgcaaaaagcgctggtgcacaggaagcccacgaggcg
atcaggcccgcaggggaacggttccttattccttctgagacacatttgatcggcaaggag
cttgccctgtatgaattgatctggaagcgtaccctggcaagccagatggcggaggccaaa
aaagccaccactaccgttacgcttgaggcaggagagggaacctttactgcaaccggaacg
gaaattgtgtttcccggctttctgagagcctatgtggaagggtcggatgaccccgatgcc
gctttggaagacaaggaaaccttattgcctgccatgaaggtaggccaagtctgcccgctt
gcaagccttgttgaagtcgagcaccaaaccaagagccctgcccgttatacggaagcctac
ttggtgcaggagctggagaaacggggaatcgggcgtccttcaacctatgctaccatcatt
aagacgcttttggaccgtcgctatgcaatcaaggaagggtctgccttggctccgaccttc
atcgggtttgccgtgtgccaatttctggagaccaattttccccagttcgtcgattatgac
tttacctcgatgatggaagatggcttggacaagattgcatcgggagaactcgataagata
gtgtttctcagttccttctattgtggtgaaagcggcctgttgagccagaatgccttacaa
cttaagcaggataacaaggtagtttccaagacgttgatactgccccatatcagcgataag
aacccggtcatgatagggccctacggtgcgtatgtcattgatgcaaatgaggcgttcatt
tccttgccgctttcctggataccgggcaatatcaccgatgaggatgtcaaaaccctgatc
gccaacggcaaggagaaacaacagccggtaacgttgggcagtggtgctgtcaagggtgag
gcggtgaaggtcatgaacggcaggttcgggccctattggcaggaaggcgagggaaaggat
gccaaacgcgcaagcatacccaaatgggtgcaggatgccaaccgatccgaggaattggag
ctggccaaccgctatctcagtcttcccagaaatctgggaaaggatgaggatggcaatgag
gtgcttgcctacaaaggcaagtacgggccctacattgcaagcaacaataagacacggaac
ctgaaaaagaccgatcatgaccaagagcttttctcgatcaccttgaaggaggctcttgca
ttgctttcccaagaagttgagaagagtggtgccaagggcaaaaagggcggtgcaaggtcg
gctaaggcttctacggtcaaggaccttggccagtttgaaggtgaagcggtttcggtggca
accggtcggtatggcttctacctgaaagcgggcaaggagaatatcgcactgcccgatgca
tacaagaaagatgaagagaaagcactttcgcttacgctcgatgaagctgtcgagcacatc
cgcaccaagcgtgcgaaggaatga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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