KEGG   Salmonella bongori serovar 48 z41 --: N643_02060
Entry
N643_02060        CDS       T03249                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
sbv  Salmonella bongori serovar 48:z41:--
Pathway
sbv03030  DNA replication
sbv03430  Mismatch repair
sbv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sbv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    N643_02060
   03430 Mismatch repair
    N643_02060
   03440 Homologous recombination
    N643_02060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbv03032]
    N643_02060
   03400 DNA repair and recombination proteins [BR:sbv03400]
    N643_02060
Enzymes [BR:sbv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     N643_02060
DNA replication proteins [BR:sbv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     N643_02060
DNA repair and recombination proteins [BR:sbv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     N643_02060
SSDB
Motif
Pfam: DNA_pol3_tau_5 DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_4 AAA RuvB_N AAA_22 AAA_5 AAA_30 AAA_18 ResIII AAA_2 AAA_14 DNA_pol3_delta AAA_7 AAA_assoc_2 PIF1 TsaE nSTAND3 AAA_16
Other DBs
NCBI-ProteinID: AID24216
Position
464659..466590
AA seq 643 aa
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRHQLEYILDEEHIVHEPRALQLLSRAADGSLRDALSLTDQAIASGDGQVSTQAVSAM
LGTLDDDQALSLVEAVVDADGERVMALVNEAAARGIEWEALLVEMLGLLHRIAMVQLSPA
ALGSDMAAIEQRMRELARTVSPGDIQLYYQTLLIGRKELPWAPDRRMGVEMTLLRALAFH
PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPQQPVAQQPPAAPVGLSESTSQVLAARNQLQ
RAQGATKAKKSEPAAASRARPVNNAALERLASVSERVQARPAPSALEKAPAKKEAYRWKA
TTPVVQTKDVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA
LNAWKEENGNVVCLHLRSTQRHLNSSGAQQKLAQALSELTGSPVELTIVEDDNPAVRTPL
EWRQAIYEEKLAQARESIIADNNIQALRRFFDAELDEESIRPI
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgagttatcaggtcttagcccgaaaatggcgcccacaaacctttgctgacgtcgtcggc
caggaacatgtgctgaccgcactggcgaacggcttgtcgttagggcgtattcatcacgcg
tatcttttttccggcacgcgcggcgtcgggaaaacgtctatcgcccgactgctggcgaag
ggattgaactgcgaaacgggcatcaccgccacaccctgcggcgtctgcgataactgccgc
gaaatcgagcagggacgctttgtcgatctgattgagattgacgccgcctcgcgcacgaaa
gtggaagatacccgcgatctgctggataacgtccagtacgcgcctgcgcgcgggcgtttt
aaggtctatttgatcgacgaagtacatatgttgtcgcgccacagttttaacgcgctgctt
aaaacgcttgaagagccgcccgcgcacgtgaagtttttactggcaaccaccgatccgcag
aagctaccggtgaccattttgtctcgttgcctgcaatttcatctcaaggcgctggacgtt
gaacagattcgccatcagcttgagtatattcttgatgaagaacatatcgttcacgaacct
cgcgcgttgcaactgttatcacgggcggctgacggcagtttgcgcgatgcgctaagtttg
actgaccaggctatcgccagcggcgacggacaggtctcaacacaagcagtaagcgcgatg
ctcggcacactggacgacgaccaggcgctgtcattagtggaagcggtagttgacgccgat
ggcgaacgtgttatggcgcttgtcaatgaggcggcggcgcgcggtatcgaatgggaagcg
ctactcgtcgaaatgcttggcctgctgcaccgtattgcgatggtacaactttcgcctgct
gcgttaggcagcgatatggcggccattgaacaacgaatgcgcgagcttgcccggacggtg
tctccaggcgacatccagctttattaccagacgttgctgattggccgtaaagaattgccc
tgggcgccagataggcgtatgggcgttgaaatgacattactgcgtgcgctggcgtttcac
ccgcgtatgccgttaccggaaccggaagtccccagacaatcttttgcgcctgttgcgcca
acggcggtgatgacgccgacgcaggtgccgcagcagcccgtggctcaacagccgccagcg
gcgcccgttggattgtcggagagcaccagccaggtactggcggcacgtaatcagttgcag
cgcgcgcagggagcaaccaaagcaaaaaagagtgaaccggcagccgcatcccgcgcgcgg
ccggtgaataacgctgcgctggagcggctggcctccgtatcggaacgcgtacaggcacgt
cctgcaccgagcgcgctggaaaaggcgccagcgaagaaagaggcgtatcgctggaaggcg
acaaccccagtggtgcagaccaaagacgttgttgcgacgccaaaagcgctaaaaaaagcg
ctggagcatgaaaaaacgccggagctggcggcaaaattagcggccgaagcgattgagcgc
gatccgtgggcggcgcaggtaagccagttgtctctgcctaagctggtggagcaggtggcg
ttaaatgcgtggaaagaagagaacggcaatgtcgtctgtctgcacctacgctcaactcag
cggcatttgaattccagtggcgcgcagcagaagctggcgcaggcgctgagcgaattaacc
ggttcaccggttgaactgactatcgttgaagatgataatccggcggtgcgtacgccgctg
gaatggcgtcaggctatttacgaagagaagcttgcgcaggcgcgcgagtcgattatcgcg
gataataacattcaggcgttgcgtcggtttttcgacgccgaactggatgaagagagtatc
cgccccatttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (32)   

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