KEGG T00863: Sca

Staphylococcus carnosus: Sca_0899

Entry

Sca_0899 CDS T00863

Gene name

polC

Definition

DNA polymerase III PolC (EC:2.7.7.7)

Orthology

K03763

DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]

Organism

sca Staphylococcus carnosus

Pathway

sca00230	Purine metabolism
sca00240	Pyrimidine metabolism
sca01100	Metabolic pathways
sca03030	DNA replication
sca03430	Mismatch repair
sca03440	Homologous recombination

Module

sca_M00260

DNA polymerase III complex, bacteria

Class

Metabolism; Nucleotide metabolism; Purine metabolism [PATH:sca00230]
Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:sca00240]
Genetic Information Processing; Replication and repair; DNA replication [PATH:sca03030]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:sca03430]
Genetic Information Processing; Replication and repair; Homologous recombination [PATH:sca03440]

SSDB

Motif

Pfam:

DNA_pol3_alpha PHP RNase_T DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 HHH_3 tRNA_anti-codon HHH_5

Other DBs

NCBI-GI:

224476387

NCBI-GeneID:

7551962

UniProt:

B9DPF0

Position

902214..906527

AA seq 1437 aa
MAMTNQEKFKVLADQIKIANQLEPEILEQSELNRIDVSSKARTWLFQITLPHFLSHEDYL
LFTHALTEEFKDIATVNWHFKVQNTTNQDEYAMKYFNHCIDQTRLSPKVKGQLKQKRLIM
SGDVLKVMVSNDVERDYFHKACNGSLVKAYRQCGFDVNKIVFETDNDGQDADLASLEAYI
QEEDQQSAKEATEKLEKMKAEKAKQQDNNENTVAKCQIGKPIQVDNVRPIESIIEEEFKV
AIEGVIFDMNIKELKSGRHIVELKVTDYTDSLVLKMFTRKNKDDLEHFKALSVGKWVRAQ
GRIEEDTFVRDLVMMMSDIEEIKKTPKQDKADDKRVELHLHTAMSQMDGINNIGDYVAQA
AKWGHPAIAVTDHSVVQAFPDAFAAAEKNDIKMLYGMEGMLVDDGVPIAYKPTDRILKDA
TYVVFDVETTGLSNQYDKIIELAAVKVHDGEIIDKFERFSNPHERLSDTIKNLTHISDDM
LVDAPEIDDVLTEFKEWVGDAIFVAHNASFDMGFIDTGYERAGLGNYTNGVIDTLELSRT
INTEFGKHGLNFLAKKYGVELTQHHRAIYDTEATAYIFIKMLKQVEELGVTNHKDINQSL
SNEDAYKRARPSHITILVQNQDGLKNLFKIVSESLVTYYYRTPRIPRSLLDEYREGLLIG
TACDEGEVFTAVMQKDQSQVERIAKYYDYIEVQPPALYQDLIDRELIRDNKTMEEIYERL
LKAGEAVNVPIVATGNVHYLNEHDSIARKILIASQPGNPLNRSTLPEAHFRTTDEMLDAF
HFLGEEKAHEIVVENTQALADRIERVVPIKDKLYTPRMEGANEEIREMSYENARKLYGDD
LPQIVIDRLEKELESIIGNGFSVIYLISQRLVKKSLNDGYLVGSRGSVGSSFVATMTEIT
EVNPLPPHYICPKCKKSEFFNDGSVGSGFDLPDKKCECGAEMIKEGQDIPFETFLGFKGD
KVPDIDLNFSGEYQPEAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGYVKGYLNDQGIHKR
GAEVDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPVQYPADDQSSPWMTTHFDFHS
IHDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKETMRIFSTPESLGVTEEEIMCK
TGTFGVPEFGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQDLVRSGTCDLSGV
IGCRDDIMVYLMYAGLEPSLAFKIMEAVRKGKGLQEEWEEVMKENNVPDWYLDSCKKIKY
MFPKAHAAAYVLMAMRIAYFKVHYPLYYYASYFTVRASDFDLITMIKDKEGIKTVVKDMY
SKYMELGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKSQAFEFIIEGDTLIPPFISVPGL
GENVAKRIVEAREEGPFLSKEDLNKKAGLSQKVIEYLDELGSLPGLPDKAQLSIFDM

NT seq 4314 nt +upstreamnt +downstreamnt
ttggcaatgacaaatcaagaaaaatttaaagttctagctgatcagattaaaattgcgaat
cagttagaacctgaaatattagaacaaagtgaattaaatcgtattgatgtgtcgtcaaaa
gcacgcacatggcttttccaaatcaccttgccgcactttttatctcacgaagattactta
ctattcactcatgcactgactgaagaattcaaagatattgctacagtcaactggcacttc
aaagttcaaaatactacgaaccaagatgaatatgcgatgaaatactttaaccactgtatt
gatcaaacgcgcttatcaccaaaagtcaaagggcagttgaaacaaaaacgtttgattatg
tcaggtgacgttttaaaagtaatggtttcaaatgatgttgaacgagattatttccataaa
gcatgtaatgggagtctagtgaaagcataccgccaatgtggttttgacgtaaataagatc
gtgtttgaaacagataatgatggacaagatgcggatcttgcttctttagaggcttacatt
caagaagaagatcagcaaagtgctaaagaagctactgaaaaattagagaaaatgaaagct
gaaaaggcaaaacaacaagataacaatgaaaatacagtagcgaaatgccaaatcggtaaa
cctattcaagttgataatgtgcgtccaatcgaatctattatcgaagaagaattcaaagta
gcaattgaaggcgttatttttgatatgaatattaaagaattgaaaagtggacgccacatt
gttgaattaaaagtaacagactatacagattcacttgtacttaaaatgtttacacgtaaa
aacaaagatgatttagaacatttcaaagcgttaagtgtcggcaaatgggtacgtgcacaa
ggacgtattgaagaagatacatttgtacgcgacttagttatgatgatgtctgatattgaa
gaaatcaaaaaaacaccaaaacaagataaagcagatgacaaacgtgttgaattgcacttg
catactgcaatgagccaaatggatggtattaataatatcggagattatgtagcgcaagca
gctaaatggggacatcctgcaattgctgtaacagatcacagtgttgtacaagctttccct
gatgcttttgcggctgctgaaaaaaatgacattaaaatgttgtatggtatggaaggaatg
ctcgtagatgatggtgttccgattgcttataaaccgacagaccgtattttaaaagatgct
acgtatgtagtgtttgacgtggaaacaacaggactgtcaaaccaatacgataaaattatt
gaattagccgctgtaaaagtacatgatggcgagattattgataaatttgaacgtttcagt
aatccgcatgaacgtttatctgatacaatcaaaaacttaacgcatatttctgatgatatg
ttagtggatgcaccagaaattgatgatgtattaactgagtttaaagagtgggtcggagat
gcgattttcgtagcgcataatgcttcattcgatatgggctttattgacacaggatatgaa
cgtgcaggactcggcaattatacaaatggtgttatcgataccttagaactttctcgtacg
attaatacagaattcggtaagcatggtttgaacttcttagctaaaaaatatggcgtagaa
ctgacacaacatcaccgtgccatttatgatacagaagcaactgcgtatatttttattaaa
atgttgaaacaagtagaagaacttggtgtaactaaccataaagatataaatcagtcttta
tctaatgaagatgcttataaacgtgcacgtccaagtcacattacaattttggttcaaaac
caagatggattaaaaaacttatttaaaatcgtcagtgaatctttggtcacttattattat
cgtacaccaagaatcccgcgttcgttattagatgaatatcgtgaaggattgttgattggt
actgcttgtgatgaaggtgaagtctttactgctgtaatgcaaaaagaccaatctcaagta
gaacgtattgcgaaatactatgactatattgaagtacaaccaccagcgttgtatcaagat
ttgattgatcgagaattgattcgtgataataaaacgatggaagaaatttatgaacggttg
ttaaaagcaggagaagcggttaatgtaccgattgttgcaacaggtaatgtgcattatttg
aatgaacatgattcaatcgcacgtaaaattttgattgcctctcaaccaggtaacccgctt
aaccgttcaacattaccagaagcacatttccgtactacggatgaaatgttggatgcattc
catttcttaggcgaagaaaaagcacatgaaattgtagttgaaaatactcaagcactcgca
gaccgtattgaacgtgttgttccgattaaagataaattgtatacaccgcgtatggaaggt
gcaaacgaagaaattcgtgaaatgagttatgaaaatgcgcgtaaattgtatggcgatgat
ttaccgcaaattgtaatagatagattggaaaaagaattagaaagtatcatcggtaatggt
ttctctgttatctatttgatttcacaacgtttggttaaaaaatcattgaatgatggttac
ttagtaggctctcgtggttctgtcggttccagtttcgtagcaactatgacagaaattacc
gaagtgaatccattaccaccacattatatttgtccaaaatgtaagaaaagcgaattcttc
aatgatggttcggtcggttcaggttttgacttgccagataaaaaatgtgaatgcggtgct
gaaatgattaaagaagggcaagatattcctttcgaaactttcttaggattcaaaggggat
aaagttcctgatattgacttgaacttcagtggtgaatatcaaccagaagcccataactat
acaaaagtgttattcggtgaagacaaagtattccgtgccggtacaattggtactgttgca
gaaaaaacagcattcggttatgtcaaaggttatttaaatgaccaaggtattcataagcgc
ggtgcagaagtggatcgtttggtgaaaggttgtacgggtgttaaacgtactacaggtcaa
catccaggcggtattattgttgtaccggattacatggatatatatgattttacgcctgtt
caatatccagctgatgaccaatcatcaccttggatgacgacacactttgacttccactca
attcacgataatgtgttgaaactcgatattctgggtcatgatgatccgacaatgattcgt
atgcttcaagatttatcaggtattgatccgaaaacgataccggttgacgataaagaaacg
atgcgtattttcagtacacctgaatcacttggggtgacagaagaagagattatgtgtaaa
acaggaacattcggtgtaccagagtttggtacgggattcgtaagacaaatgcttgaagat
acaaaaccaacaactttctcagagcttgttcaaatttccggtctgtctcatggtacagat
gtatggttaggcaatgctcaagatttagttcgttcaggtacttgtgacttatcaggtgta
atcggttgtcgtgacgacatcatggtttacttgatgtatgcaggtcttgaaccgtcacta
gccttcaaaattatggaagcggtacgtaaaggtaaaggcttgcaagaagagtgggaagaa
gtcatgaaagagaataacgtaccagattggtatttagattcttgtaaaaaaatcaagtac
atgttcccgaaagcccatgctgcagcatatgttttaatggctatgcgtattgcatacttt
aaagtacattatccgctttattattatgcaagttacttcacagtacgtgcatcagacttt
gatttaattacaatgattaaagacaaagaaggtattaaaactgtcgtgaaggacatgtat
tctaaatacatggagcttggtaaaaaagaaaaagatgttttgactgtgttagaaattatg
aatgaaatggcgcatcgtggttatcgtatgcagccgattagtttggaaaaaagccaagcc
tttgaatttattattgaaggcgacactttaatcccgccgtttatttcagttcctggatta
ggtgaaaacgttgcaaaacgtattgttgaagcacgtgaagaaggcccattcttatctaaa
gaagatttgaataaaaaagctggtttatcacaaaaagttatcgaatatcttgatgaatta
ggttcattaccaggccttccagataaagcgcaattatcaatttttgatatgtaa

All links

Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (34)   

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