KEGG   Staphylococcus carnosus subsp. carnosus: SCA_1140
Entry
SCA_1140          CDS       T00863                                 
Symbol
bfmBC
Name
(GenBank) putative E3 component of branched-chain alpha-keto acid dehydrogenase complex
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sca  Staphylococcus carnosus subsp. carnosus
Pathway
sca00010  Glycolysis / Gluconeogenesis
sca00020  Citrate cycle (TCA cycle)
sca00260  Glycine, serine and threonine metabolism
sca00280  Valine, leucine and isoleucine degradation
sca00310  Lysine degradation
sca00380  Tryptophan metabolism
sca00620  Pyruvate metabolism
sca00630  Glyoxylate and dicarboxylate metabolism
sca00640  Propanoate metabolism
sca00785  Lipoic acid metabolism
sca01100  Metabolic pathways
sca01110  Biosynthesis of secondary metabolites
sca01120  Microbial metabolism in diverse environments
sca01200  Carbon metabolism
sca01210  2-Oxocarboxylic acid metabolism
sca01240  Biosynthesis of cofactors
Module
sca_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sca_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sca_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sca_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sca00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SCA_1140 (bfmBC)
   00020 Citrate cycle (TCA cycle)
    SCA_1140 (bfmBC)
   00620 Pyruvate metabolism
    SCA_1140 (bfmBC)
   00630 Glyoxylate and dicarboxylate metabolism
    SCA_1140 (bfmBC)
   00640 Propanoate metabolism
    SCA_1140 (bfmBC)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SCA_1140 (bfmBC)
   00280 Valine, leucine and isoleucine degradation
    SCA_1140 (bfmBC)
   00310 Lysine degradation
    SCA_1140 (bfmBC)
   00380 Tryptophan metabolism
    SCA_1140 (bfmBC)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SCA_1140 (bfmBC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sca04147]
    SCA_1140 (bfmBC)
Enzymes [BR:sca01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SCA_1140 (bfmBC)
Exosome [BR:sca04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SCA_1140 (bfmBC)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 GIDA FAD_oxidored AlaDh_PNT_C HI0933_like FAD_binding_2 DAO Trp_halogenase FAD_binding_3 3HCDH_N Lycopene_cycl Thi4 2-Hacid_dh_C NAD_binding_7 TrkA_N XdhC_C
Other DBs
NCBI-ProteinID: CAL28048
UniProt: B9DNR7
Position
complement(1158144..1159568)
AA seq 474 aa
MAEEQYDLVILGGGTAGYVAGIRASQLGKKVAIVENQLLGGTCLHKGCIPTKSLLKSAEV
LHTVKTSSLYGIDTDEYSINYSKILDRKDEIVNQMYTGIEYLMQHNHIDIYNGTGRILGS
SIFSPRPGTISVEYENGESELIPNDYVLIATGSQPADLPFLKFNHETIVSSTDLLKLKEL
PKSIVIVGGGVIGMEFASLLNDFGTDVTVIEAGESILPNENKSVVSNLKDHFAKRGIKIH
ENVLLSEDNIKINNESIEINNKELNVTADKLLLAVGRKPNTSDIGLNNTKIKLDSKGFIE
VNENQQTAEQHIFAAGDCIGKLQLAHAGSKEGTAAVEFMFEDGSIPVDYNSIPRCIYTHP
EIASIGMTLEEAKNADFKKARSFKVPFKAIGKAVIEDAEHHDGFCEIVVDQSTDSVLGMS
MIGPHVTELINEVALLQFMNGSTLELGLTTHAHPSLSEVLMEAGLKASKRSVHA
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggcagaagaacaatatgacctagtgatattgggaggcggaactgcaggctatgtagca
ggtattcgcgcatctcaattaggaaaaaaagtcgctatagtagaaaatcaattattagga
ggaacttgtttacataaaggctgcattccaacaaagtctttattaaaatcagcagaagta
ttacatactgtaaaaacatcatctttatacggtattgatacagatgaatattcaattaat
tatagtaaaatattagatagaaaagacgaaattgtaaatcaaatgtataccggaatcgaa
tatctaatgcaacataatcatattgatatatataatgggactggaagaatcttaggatct
tcaattttttctccgagaccaggcactatttctgttgaatatgaaaatggagagtctgaa
ttaattccaaatgactacgtgttaattgcaacaggttcacaacctgcagatcttccattt
ttaaaattcaatcatgagacaatcgtttcaagtactgatctgcttaaattaaaagaacta
ccaaaatctattgtaattgttggtggtggtgtgataggaatggaatttgcttcattactc
aatgatttcggaacggatgtcactgtaatcgaagctggtgaaagtattttaccaaatgaa
aacaaaagcgttgttagtaatttaaaggaccatttcgcaaaaagaggcattaaaattcac
gaaaatgtgttactttctgaagacaatatcaaaataaataatgaatctatagaaattaat
aataaagagcttaacgtgacagctgataaattgcttctagcagttggtagaaaaccaaac
acttcagatatagggcttaataatacaaaaatcaaattagattctaaaggatttattgaa
gtaaatgaaaatcaacaaactgctgaacagcatatttttgctgcgggggattgtattggt
aaactgcaacttgcacatgctggatcaaaagaagggacagcggcagtagaatttatgttt
gaagatggatctattccagtcgattataattctataccaagatgtatttatactcatcct
gaaattgcttctatcggaatgacacttgaagaagcaaaaaatgccgatttcaaaaaagct
agaagtttcaaagtaccctttaaagctattggcaaagcggttattgaggatgcagaacat
cacgatggattttgtgagattgtagtagatcaatctacagattcagtattaggtatgagt
atgataggtccacatgtcactgaattaataaatgaagtagcattattgcaatttatgaac
ggttcaacacttgagttaggattgacaacacatgcacatccttcattatctgaagtgtta
atggaagctggacttaaagcatcaaaacgctcagttcatgcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (89)   

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