KEGG   Staphylococcus capitis subsp. capitis: AYP1020_0542
Entry
AYP1020_0542      CDS       T03970                                 
Symbol
rnc
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
scap  Staphylococcus capitis subsp. capitis
Brite
KEGG Orthology (KO) [BR:scap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scap03019]
    AYP1020_0542 (rnc)
   03009 Ribosome biogenesis [BR:scap03009]
    AYP1020_0542 (rnc)
   03036 Chromosome and associated proteins [BR:scap03036]
    AYP1020_0542 (rnc)
Enzymes [BR:scap01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     AYP1020_0542 (rnc)
Messenger RNA biogenesis [BR:scap03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AYP1020_0542 (rnc)
Ribosome biogenesis [BR:scap03009]
 Eukaryotic type
  90S particles
   RNase
    AYP1020_0542 (rnc)
 Prokaryotic type
  rRNA processing factors
   AYP1020_0542 (rnc)
Chromosome and associated proteins [BR:scap03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     AYP1020_0542 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm Phage_P2_GpU
Other DBs
NCBI-ProteinID: AKL91689
Position
533238..533975
AA seq 245 aa
MANHKKREMVKEFQQKFTNKMNEWGFNFNNIDLYQQAFSHSSFINDFNMNRLDHNERLEF
LGDAVLELTVSRYLFDKHPHLPEGNLTKMRATIVCEPSLVIFANKIDLNELILLGKGEEK
TGGRTRPSLISDAFEAFVGALYLDQGLDTVWKFAEKVIFPYVEDDELVGVVDFKTQFQEY
VHRQNKGDVTYRLIKEEGPAHHRLFTSEVILENNAVAEGKGKTKKESEQKAAEQAYKSMK
KNESF
NT seq 738 nt   +upstreamnt  +downstreamnt
gtggctaaccataaaaagagagagatggtcaaagaatttcaacaaaaatttaccaacaaa
atgaatgagtggggttttaattttaataatatcgatttgtatcaacaagcgttctcacat
tcgagttttatcaatgattttaatatgaatcgacttgatcataatgaacgtttagaattt
ttaggtgatgcggtattagaattgacggtttcacgctatttgtttgataagcatcctcat
ttgccagaaggtaatctgacaaagatgcgtgcaacaattgtttgtgagccctcacttgta
atatttgcaaataaaattgatttaaatgaacttattttattggggaaaggtgaagaaaaa
acaggcggtagaactagaccatcattaatatctgatgcttttgaagcatttgtaggtgct
ttatatttagaccaaggtttagatactgtatggaaatttgctgagaaagtcattttccca
tatgtagaagatgatgaattagttggtgtggtcgactttaaaacacagtttcaagaatac
gtacatcgacaaaataaaggtgatgtgacctatcgccttattaaagaagagggtcctgcc
caccataggttatttacttctgaagttattttagaaaataatgcagttgcagagggtaaa
ggaaagacgaagaaagaatccgaacaaaaggcagccgagcaagcttataagtcaatgaag
aaaaatgagtcattttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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