KEGG T01187: SCAB

Streptomyces scabiei: SCAB_17401

Entry

SCAB_17401 CDS T01187

Definition

hypothetical protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

scb Streptomyces scabiei

Pathway

scb03410	Base excision repair
scb03420	Nucleotide excision repair
scb03430	Mismatch repair
scb03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:scb03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:scb03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:scb03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:scb03450]

SSDB

Motif

Pfam:

DNA_primase_S

Other DBs

NCBI-GI:

290956254

NCBI-GeneID:

8846194

UniProt:

C9ZET8

Position

complement(1958178..1959167)

AA seq 329 aa
MANTHRMRVGRRTVEIHRPDKVLFPGSGDSDGDGNRGDGDGDRGHGNRGDGGGKEYTKAD
LVAYHRAVAPFMLPHLRGRPLMLERHPDGIDGPMFMQKNTPGHYPDWIERVEVTKEGGTV
VHPVCEDAATLVYLADQACLTLHRWLSRTGDVHRPDRLVVDLDPAVDDFATVRDAAVLVR
ELLDELRLPSVPMTTGSRGVHVVVPLNGRADFDEVRAFAGEIAGTLVRAHPGRLTTEARK
KDRGDRLYLDIQRNAYAQTAVAPYTVRALPGAPVAAPLTWEQLADPAVDARRWTLADALD
QARTDPWAGAMSRGRALGPARRRLAALHG

NT seq 990 nt +upstreamnt +downstreamnt
atggcgaacacccaccggatgcgggtcggccgccggaccgtcgagatccaccggccggac
aaggtgctgttccccggaagcggagacagcgacggcgacggcaaccgtggtgacggcgac
ggcgaccgtggtcacggcaaccgtggcgacggcggcggcaaggaatacaccaaggccgat
ctcgtcgcctaccaccgggccgtcgcccccttcatgctgccgcacctgcgcgggcgcccg
ctgatgctggaacggcaccccgacggcatcgacggacccatgttcatgcagaagaacacc
cccgggcactacccggactggatcgagcgcgtcgaggtcaccaaggagggcggcaccgtc
gtccaccccgtgtgcgaggacgcggccaccctcgtctacctggccgaccaggcctgcctc
accctgcaccgctggctctcccgcaccggcgacgtccaccggcccgatcggctggtcgtc
gacctcgacccggcggtcgacgacttcgccacggtccgggacgccgcggtcctcgtacgg
gagctgttggacgagctgaggctgccgtcggtgccgatgaccaccggttccaggggggtc
cacgtcgtcgtgccgctgaacggccgcgcggacttcgacgaggtccgcgccttcgccggg
gagatcgccgggaccctggtccgcgcccatcccgggcggctgacgaccgaggcccgcaag
aaggaccgcggcgaccggctctacctcgacatccagcgcaacgcctacgcccagaccgcc
gtcgccccctacaccgtgcgggccctccccggcgcgcccgtggccgcgcccctcacctgg
gaacagctcgccgaccccgccgtcgacgcccgccgctggaccctcgcggacgccctcgac
caggcccgcaccgacccctgggccggggcgatgagcaggggacgggcgctggggccggcc
cggcggaggctcgcggcgctgcacggctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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