KEGG T01187: SCAB

Streptomyces scabiei: SCAB_29521

Entry

SCAB_29521 CDS T01187

Definition

hypothetical protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

scb Streptomyces scabiei

Pathway

scb03410	Base excision repair
scb03420	Nucleotide excision repair
scb03430	Mismatch repair
scb03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:scb03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:scb03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:scb03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:scb03450]

SSDB

Motif

Pfam:

DNA_primase_S

Other DBs

NCBI-GI:

290957431

NCBI-GeneID:

8839901

UniProt:

C9ZA62

Position

3363102..3363983

AA seq 293 aa
MTPITEVEGRRIVLSHLEKVLHPATGFTKGELLHYYATTADALLPHLRDRPVSFLRYPDG
PGGQVFFTKNVPPGTPDWVTTAEVRRMEGPARMVLVQDLASLMWASNQVAEFHTPQWTVG
SGEEADRLVLDLDPGEPATIVECCEVARWLRERLAEDGIEAYAKTSGSKGLHLLAAVRGA
TSERVSEYARELAVEAEKALPRLVVHRMNRSLRPGKVFVDWSQNAARKTTAAPYTLRARP
EPTVSAPVTWAEVEECGSPAHLVFRAPDIAPRLRDHGDLLAPLLDAEAAHALP

NT seq 882 nt +upstreamnt +downstreamnt
atgacaccgatcaccgaggtggagggccgccggatcgtcctctcccatctggagaaggtc
ctccacccggcgacgggtttcaccaagggtgagctgctgcactactacgccacgaccgcg
gacgccctgctgccgcatctgcgcgaccgcccggtctccttcctccgttacccggacggt
ccgggcggacaggtcttcttcaccaagaacgtgccgccgggcactccggactgggtcacc
accgccgaggtgcggcggatggagggaccggcccggatggtgctggtgcaggacctggcg
agcctgatgtgggcctcgaaccaggtcgccgagttccacaccccgcagtggaccgtcggc
tccggcgaggaggccgaccggctcgtcctcgacctggacccgggggaacccgcgacgatc
gtcgagtgctgcgaggtcgcccgctggctgcgggagcggctcgcggaggacgggatcgag
gcgtacgcgaagacgtccgggtcgaaggggctgcatctgctggcggcggtgcgcggggcg
acctcggagcgggtgtcggagtacgccagggaactcgccgtcgaggccgagaaggcgctg
ccccgcctggtcgtgcaccggatgaaccgcagtctgcgccccggcaaggtgttcgtggac
tggagtcagaacgccgcccgcaagaccacggcggcgccctacacgctgcgcgcccgcccc
gagccgaccgtctccgcgccggtgacgtgggccgaggtggaggagtgcggctcccccgcg
cacctggtgttccgcgccccggacatcgccccccgcctccgggatcacggcgatctgctg
gcgccgctcctcgacgcggaggccgcgcacgcgctgccgtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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