KEGG   Streptomyces scabiei: SCAB_30721
Entry
SCAB_30721        CDS       T01187                                 
Name
(GenBank) putative ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
scb  Streptomyces scabiei
Pathway
scb03420  Nucleotide excision repair
scb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:scb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SCAB_30721
   03430 Mismatch repair
    SCAB_30721
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scb03400]
    SCAB_30721
Enzymes [BR:scb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SCAB_30721
DNA repair and recombination proteins [BR:scb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SCAB_30721
   MMR (mismatch excision repair)
    Other MMR factors
     SCAB_30721
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 HRDC UvrD_C_2 AAA_30 C1_1 AAA_12 Viral_helicase1 AAA_11 TF_Zn_Ribbon Zn_ribbon_SprT DUF6011
Other DBs
NCBI-ProteinID: CBG70175
UniProt: C9ZBR7
Position
complement(3481364..3483586)
AA seq 740 aa
MTAATHSTLFPRVPDSADAVLEGLDPEQRAVATALHGPVCVLAGAGTGKTRAITHRIAYG
VRAGMLQPASVLAVTFTNRAAGEMRGRLRQLGAAGVQARTFHSAALRQLQYFWPKAVGGA
MPRIVDRKIQLVADAAAACRIRLDRNELRDAAAEIEWSKVTRTVPSDYAAATAKHGREAP
RDPAEIAQIYAVYEELKRERVVIDFEDVLLLTVGILQDRQDIAEQVRSQYQHFVVDEYQD
VSPLQQRLLELWLGDRDDLCVVGDASQTIYSFTGATPDHLLDFRHRHPGATVVKLVRDYR
STPQVVHLANGLLSQARGRAADHRLELISQRAPGPEPRYTEYTDEPAEAEGAARRIRDLV
AAGVPAGEIAILFRTNSQSETYEQALADAGVPYQLRGAERFFDRPEVRKAGAALRAAARF
GGNDTLLEDAVDLPSQVRAVLSGEGWTGEPPAGSGAVRERWESLAALVNLAHDFAAARPD
ATLGDLVAELDERANAQHAPTVQGVTLASLHSAKGLEWDVVFLVGVAEGMMPITYARTDE
QIEEERRLLYVGVTRAREQLSVSWALSRAPGGRPGRRPSRFLDGLRPGSTARAGRTGAGG
TGGVERGSAGGRTGQGTAGGTEAVARRTSRTPARCRVCGRTLRDAGDMKLMRCEDCPSDM
DEGLYERLREWRAVQAQRSGQPDFCVFTDRTLMAIAEAGPSTPVELGRIPGVRTRKLQRY
GADVLDICAGREPGCEDRND
NT seq 2223 nt   +upstreamnt  +downstreamnt
gtgacagcagcaacgcactccaccctcttcccgcgggtccccgactcggccgacgcggtg
ctcgaagggctcgaccccgagcaacgcgcggtggcgacggccctgcacggcccggtgtgc
gtgctggcgggcgctggtacgggcaagacccgggcgatcacccaccggatcgcctacggc
gtgcgagccgggatgctccagcccgccagtgtgctggccgtcaccttcaccaaccgcgcc
gccggcgagatgcgcggccgcctccgccagctcggtgccgccggagtccaggcccggacg
ttccactcggccgcgctgcgccagctccagtacttctggccgaaggccgtcggcggtgcc
atgccgcgcattgtcgaccgcaagatccagctcgtcgcggacgcggccgccgcctgccgc
atccgtctcgatcgcaatgaactccgcgacgccgcagcggagatcgagtggtccaaggtc
acccggaccgtgccctccgactacgccgccgcgaccgccaagcacggccgcgaggccccc
cgggacccggcggagatcgcccagatctacgcggtgtacgaggagctgaagcgcgagcgg
gtcgtcatcgacttcgaggacgtcctcctgctcacggtcggtatcctccaggaccgccag
gacatcgccgagcaggtccgctcccagtaccagcacttcgtggtcgacgagtatcaggac
gtcagccccctccagcagcgtctcctggagctgtggctcggcgaccgggacgacctgtgc
gtcgtgggcgacgccagccagacgatctactcgttcacaggagcaactcccgaccatctg
ctcgacttccgccaccgtcaccccggggccaccgtcgtcaagctggttcgcgactaccgc
tccacgccgcaggtcgtccacctcgccaacggtctgctgtcccaggcccgcggccgcgcc
gccgaccatcgcctcgaactgatctcgcagcgcgcaccgggcccggagccccgctacacc
gaatacacggacgagcccgccgaggccgagggcgccgcccgccgcatccgggatctcgtc
gccgccggtgtgcccgccggcgagatcgccatcctgttccggaccaactcccagtccgag
acctatgagcaggccctcgcggacgccggggtgccctaccagctgcgcggagcggaacgc
ttcttcgaccgccccgaggtacgcaaggcgggtgccgcgctgagagccgccgcccgcttc
ggcggcaacgacaccctgctcgaggacgccgtcgaccttccctcgcaggtgcgggccgtg
ctgtccggcgaggggtggaccggtgaaccccccgcggggtccggcgcggtcagggaacgc
tgggagtcgctggcggccctggtgaacctggcccacgacttcgccgcggccagacccgac
gcgacactcggcgacctcgtcgcggaacttgacgaacgcgcgaacgcccagcacgccccg
accgtccagggcgtcaccctcgcctccctgcactccgcgaaagggctggagtgggacgtc
gtctttctggtgggtgtcgccgagggcatgatgccgatcacctacgcgagaacggacgaa
cagatcgaggaggagaggcgactcctctacgtgggggtcacccgggcgcgcgagcaactg
tcggtctcctgggccctgtcccgggcgcccggtggccgtcccggccgccgtcccagccgc
ttcctcgacggactgcgccccggctccaccgcccgggcgggccggaccggtgccgggggc
accggtggcgtcgaacggggctcggcgggcggccgtacgggtcagggcacggccggcggc
accgaggcggtcgcccgccgcaccagccggacgcccgcccgctgccgtgtctgcgggcgc
accctgcgggacgccggggacatgaagctgatgcgctgcgaggactgcccctccgacatg
gacgagggcctctacgagcgactgcgcgagtggcgcgcggtccaggcgcagcgcagcggc
caaccggacttctgtgtcttcaccgacagaaccctgatggcgatcgcggaagcggggccg
agcactccggttgagctcggccgcatccccggtgtgcgcacccgaaagctgcagcgctac
ggggccgatgttctcgacatctgcgcaggtcgggagcctgggtgcgaggaccggaacgac
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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