KEGG   Gracilinema caldarium: Spica_1040
Entry
Spica_1040        CDS       T01573                                 
Name
(GenBank) tRNA-specific 2-thiouridylase mnmA
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
scd  Gracilinema caldarium
Pathway
scd04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:scd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    Spica_1040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:scd03016]
    Spica_1040
Enzymes [BR:scd01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     Spica_1040
Transfer RNA biogenesis [BR:scd03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    Spica_1040
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_M tRNA_Me_trans_C ThiI Asn_synthase NAD_synthase QueC Arginosuc_synth VirK ATP_bind_3
Other DBs
NCBI-ProteinID: AEJ19189
UniProt: F8EXG2
Position
1148379..1149608
AA seq 409 aa
MLSYDILNTLEELSLPPAGSVVAVAMSGGVDSSLVAYLMAERGCKVIGVTMKVYDGSIQF
PEGAGNGCYGPDEVEDEAACRRLCDTLKAEYVVVDLSKSYGKEVLDYFRTEYKLGRTPNP
CLRCNPLIKFGLLPQALNQLGYAFDYYVTGHYARLFAPHGNSELGVYLAPGLDPFKDQSY
FLQRLGQDILVKTRFPLGVLRKDEVRQLARERGLEVAEKKDSQDFVAKEDYETLFEKDAL
KRGNIIDTKGRVLGEHQGIVRYTIGQRRGVGVSTGTEPLYVVALNAEKNQVVVGHEQELF
SHGLEASQSVWAPGFGYEPFRALAKIRLASKPAWALVEPHKDGTVKVSFDEAQRAIAPGQ
SVAFYVPLPDQTASEDQIPVSGPTVGNRVPAHAILAGGAVIERKLSDIA
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgttgagctatgatattctaaatactctcgaagaactttctcttccgcctgctggttct
gtagtagctgtggccatgtctggtggtgtcgattcatctctggtagcctatcttatggcc
gagcggggctgtaaggtcatcggagttactatgaaggtctatgatggatccatacaattt
cctgaaggggctggaaatggctgttatggtcccgatgaagtagaggatgaagctgcctgt
agacgcctctgcgatacactgaaggctgaatatgtggtagtcgatctttctaagtcctat
ggtaaagaagttctcgactatttcagaaccgaatacaaattgggacgtacaccgaacccc
tgtttacgctgtaatcctcttattaaatttggacttcttcctcaggcccttaaccagctt
ggttatgcttttgattattatgttactggccattatgccaggctttttgctccccatggc
aattctgaattgggtgtatatcttgccccaggactcgacccttttaaggatcagagttat
tttcttcagcgccttgggcaggatattctcgtaaaaactcgatttcccctgggggtactc
aggaaagatgaggtccgccaattagcccgggagcgaggacttgaagtagcagaaaaaaag
gacagtcaggactttgttgccaaggaagattatgaaaccctttttgaaaaagatgccctt
aaacggggtaatataatcgatactaagggcagagtattaggggaacaccagggaattgtc
cgctatacaattggacaacgtcgcggggtaggggtcagcaccggtacggagcccctttat
gtggtggcccttaatgctgaaaaaaatcaggttgttgtaggccatgaacaggagctcttt
tcacatgggcttgaagcttcccagagtgtttgggcgccaggttttggctatgaacccttt
cgtgctcttgcgaaaatacggcttgcttcaaaacctgcctgggctcttgtagaaccccat
aaggacggtactgtgaaggtttcctttgacgaagcacagcgggcgatagctccaggacaa
tcggtagctttttatgtacctttgcctgatcagactgccagtgaagaccagatccctgtc
agtggtccaacggttgggaatcgggtgccggcacatgccattttagccggcggcgctgtt
attgagcggaagctttccgacatcgcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system