KEGG   Saccharomyces cerevisiae (budding yeast): YCR057C
Entry
YCR057C           CDS       T00005                                 
Symbol
PWP2, UTP1, YCR055C, YCR058C
Name
(RefSeq) snoRNA-binding rRNA-processing protein PWP2
  KO
K14558  periodic tryptophan protein 2
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    YCR057C (PWP2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sce03009]
    YCR057C (PWP2)
Ribosome biogenesis [BR:sce03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    YCR057C (PWP2)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Utp12 NBCH_WD40 eIF2A PROPPIN Ge1_WD40 Nup160 WDR54 WD40_3
Other DBs
NCBI-GeneID: 850422
NCBI-ProteinID: NP_009984
SGD: S000000653
UniProt: P25635
Structure
Position
III:complement(220457..223228)
AA seq 923 aa
MKSDFKFSNLLGTVYRQGNITFSDDGKQLLSPVGNRVSVFDLINNKSFTFEYEHRKNIAA
IDLNKQGTLLISIDEDGRAILVNFKARNVLHHFNFKEKCSAVKFSPDGRLFALASGRFLQ
IWKTPDVNKDRQFAPFVRHRVHAGHFQDITSLTWSQDSRFILTTSKDLSAKIWSVDSEEK
NLAATTFNGHRDYVMGAFFSHDQEKIYTVSKDGAVFVWEFTKRPSDDDDNESEDDDKQEE
VDISKYSWRITKKHFFYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSM
GQNPVNTVSVNQTGEWLAFGSSKLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRV
VTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYR
NFRTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQTGQLLDALSGHEGPVSCLS
FSQENSVLASASWDKTIRIWSIFGRSQQVEPIEVYSDVLALSMRPDGKEVAVSTLKGQIS
IFNIEDAKQVGNIDCRKDIISGRFNQDRFTAKNSERSKFFTTIHYSFDGMAIVAGGNNNS
ICLYDVPNEVLLKRFIVSRNMALNGTLEFLNSKKMTEAGSLDLIDDAGENSDLEDRIDNS
LPGSQRGGDLSTRKMRPEVRVTSVQFSPTANAFAAASTEGLLIYSTNDTILFDPFDLDVD
VTPHSTVEALREKQFLNALVMAFRLNEEYLINKVYEAIPIKEIPLVASNIPAIYLPRILK
FIGDFAIESQHIEFNLIWIKALLSASGGYINEHKYLFSTAMRSIQRFIVRVAKEVVNTTT
DNKYTYRFLVSTDGSMEDGAADDDEVLLKDDADEDNEENEENDVVMESDDEEGWIGFNGK
DNKLPLSNENDSSDEEENEKELP
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgaaatccgatttcaagttctctaaccttttaggtacggtctacaggcaaggtaacatc
accttttccgatgatggcaagcaactactctcaccggtggggaatagggtcagcgtgttt
gacttaatcaacaacaaatcgttcacgtttgaatacgagcatcgcaaaaatattgctgcc
attgatctgaacaaacaaggcacattgctgatttctattgacgaggacggtcgcgccatc
cttgtcaatttcaaagcccgtaacgtgcttcaccatttcaacttcaaagaaaaatgctcc
gctgtgaagttcagccctgatgggagactctttgcattagcctcaggcaggtttttacag
atttggaagactccagatgttaataaagacagacagtttgctcccttcgtccgccatagg
gtgcatgcgggacactttcaagacataacgtctttgacgtggtcacaagattccagattt
atccttacgacttccaaagacttaagcgcaaaaatatggtccgtagattcagaggaaaag
aaccttgcggcgacaacatttaatgggcacagagactacgttatgggtgcgttcttcagt
catgatcaggaaaaaatctacactgtaagcaaagacggtgctgtctttgtctgggaattt
accaagaggccatccgatgacgacgacaatgaaagtgaagacgacgacaagcaagaagaa
gtagatatttcgaaatacagctggagaatcacaaagaaacattttttttacgcaaaccaa
gccaaagtaaagtgtgtcaccttccatccagcaacaaggcttttagctgtcggatttact
agtggggaattccgtctttacgatttgcctgatttcactttgattcaacagctttctatg
gggcaaaacccagtcaacaccgttagcgtcaaccaaaccggcgaatggctggcgtttggt
tccagcaaactgggccaattactagtttacgaatggcaatcggaatcgtatatcttgaag
cagcagggccatttcgattccacaaatagtcttgcatactctccggatggttcacgtgta
gtgacagcatccgaagatgggaaaatcaaagtttgggacattacatcagggttttgtttg
gccacttttgaagaacacacctcttcagttactgctgtacagtttgcgaaaaggggtcag
gtcatgttctcatcatcgttagatggtacggtgagagcgtgggacttaatcaggtatcgt
aattttagaacattcactggtactgaaagaatccaattcaattgtttagcggtggatcca
tcaggtgaagtggtttgtgccgggtccctggacaattttgacattcatgtttggtccgtg
caaactggtcaattattagatgctttgtccggacatgaaggccctgtttcgtgtctttca
tttagtcaagagaacagtgtcttagcttctgcatcatgggataaaacaattagaatctgg
tccatatttggtagaagccaacaagtagaacctatagaagtttattccgatgttttagcc
ttatcaatgagaccagatggtaaagaagttgcagtatctaccttaaagggtcaaatatcc
attttcaacatagaagatgccaagcaggtgggcaacattgactgtagaaaggatataata
tctggtaggtttaatcaagataggttcactgccaaaaattctgaacgatccaaatttttt
actacaatacattacagttttgatggtatggctattgtggctggtggtaataataactcc
atttgtctatatgatgttccaaatgaagtcttgttaaaaagattcattgtgtccagaaac
atggctttgaatggtactctcgaatttttaaacagtaagaaaatgactgaagcaggttca
ttagatttgattgacgatgcaggcgaaaattcagatttggaggatcgtattgataattct
ttaccagggtctcaaagaggtggcgacctgtccacaagaaaaatgagaccagaggttaga
gttacttcggtgcaattctccccaacggcgaatgcatttgccgctgcttcaacggaaggt
ttattgatatattccaccaatgacacgatattatttgatccctttgatctggatgtggac
gtcaccccccattctactgtagaggcgctacgagaaaagcagtttttaaatgcattagta
atggcgttcaggttaaatgaagaatatttgatcaataaagtctatgaagccatacctatt
aaggaaatccccttggttgcaagtaatattcctgcaatatatttaccgaggattctgaag
ttcatcggtgattttgccattgaatcccaacacattgagtttaacctaatttggatcaaa
gctctattatctgcgagcggtggttacataaatgaacacaaatatctcttctcgacggct
atgaggtcgatacaaagatttattgttagagtggctaaggaagtagtcaataccactact
gataacaaatacacctatagatttttggtatcaactgatgggtccatggaagatggcgcg
gctgatgatgacgaggttctattaaaagatgacgcagatgaagataacgaagagaacgaa
gagaacgatgtagtcatggaatctgacgacgaggaaggatggattggtttcaatgggaag
gataacaaattacccttgtctaatgaaaatgattccagtgatgaagaagaaaatgagaaa
gagcttccttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (26)   
   PDB (26)   
Protein domain (10)   
   Pfam (10)   
All databases (64)   

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