KEGG   Saccharomyces cerevisiae (budding yeast): YGL070C
Entry
YGL070C           CDS       T00005                                 
Symbol
RPB9, SSU73
Name
(RefSeq) DNA-directed RNA polymerase II core subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03020  RNA polymerase
sce03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    YGL070C (RPB9)
  09124 Replication and repair
   03420 Nucleotide excision repair
    YGL070C (RPB9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sce03021]
    YGL070C (RPB9)
   03400 DNA repair and recombination proteins [BR:sce03400]
    YGL070C (RPB9)
Transcription machinery [BR:sce03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     YGL070C (RPB9)
DNA repair and recombination proteins [BR:sce03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      YGL070C (RPB9)
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_Tnp_IS1595 zf-UBP CPxCG_zf Cytochrome_C7
Other DBs
NCBI-GeneID: 852810
NCBI-ProteinID: NP_011445
SGD: S000003038
UniProt: P27999
Structure
Position
VII:complement(374459..374827)
AA seq 122 aa
MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQ
DIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKRTQ
FS
NT seq 369 nt   +upstreamnt  +downstreamnt
atgactacgtttagattttgtcgtgactgcaacaatatgttgtaccctcgtgaggataaa
gaaaataaccggttgttatttgaatgcagaacatgctcgtatgtagaagaagcgggcagt
ccattggtctacaggcatgaattgattaccaacattggtgaaactgcgggagtggtgcaa
gatattggttccgatcccactcttccgagatctgatagagaatgtcccaaatgtcactct
cgggaaaatgtgttttttcaatcacaacaaagaagaaaggatacttcgatggttttattc
tttgtgtgcttatcttgctcacacatatttacttcagatcaaaaaaacaaaaggacgcag
ttttcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (172)   
   PDB (172)   
Protein domain (6)   
   Pfam (6)   
All databases (202)   

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