KEGG T00005: YLL036C

Saccharomyces cerevisiae (budding yeast): YLL036C

Entry

YLL036C CDS T00005

Gene name

PRP19, PSO4

Definition

E3 ubiquitin-protein ligase PRP19

Orthology

K10599

pre-mRNA-processing factor 19 [EC:6.3.2.19]

Organism

sce Saccharomyces cerevisiae (budding yeast)

Pathway

sce03040	Spliceosome
sce04120	Ubiquitin mediated proteolysis

Class

Genetic Information Processing; Transcription; Spliceosome [PATH:sce03040]
Genetic Information Processing; Folding, sorting and degradation; Ubiquitin mediated proteolysis [PATH:sce04120]

SSDB

Motif

Pfam:

Prp19 U-box Med24_N Lactonase

Other DBs

NCBI-GI:

NCBI-GeneID:

SGD:

MIPS:

UniProt:

Structure

PDB:

2BAY 3LRV 1N87

Position

XII:complement(66745..68256)

AA seq 503 aa
MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIVEIVPSAQQA
SLTESTNSATLKANYSIPNLLTSLQNEWDAIMLENFKLRSTLDSLTKKLSTVMYERDAAK
LVAAQLLMEKNEDSKDLPKSSQQAVAITREEFLQGLLQSSRDFVARGKLKAPKWPILKNL
ELLQAQNYSRNIKTFPYKELNKSMYYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPR
TGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTE
YFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS
SPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFK
TGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVV
CGDGGIAAILKTNDSFNIVALTP

NT seq 1512 nt +upstreamnt +downstreamnt
atgctttgtgctattagtgggaaagttcctagaaggccagttctatcacctaaatccagg
actatttttgaaaagtcgctccttgaacagtatgttaaagatacggggaatgatccgata
acaaatgagcccttaagcatcgaagaaatagtggaaatcgtacctagtgcgcaacaagcc
tcactaacagagtctacaaactctgctacgttaaaagcgaattattcgattccgaatctg
ttgacaagtttacagaatgaatgggatgctataatgctcgaaaactttaagttacgatca
actctagatagtttaacgaaaaaactgtcgactgtaatgtacgaaagagatgctgcaaag
ttggtcgctgcgcaactattgatggaaaaaaacgaagattcgaaggatttacccaaatcc
tcacagcaagcggtagctattacgagagaagaatttttacaagggctgttacaatcttct
agagactttgtagcgaggggcaagctcaaagcacccaaatggccgattttaaaaaatttg
gagctattacaggcacaaaattactcccgtaacatcaaaacattcccatataaagagctt
aacaaatctatgtactatgataaatgggtgtgcatgtgtcgctgtgaggatggtgcttta
cattttacccaattaaaagattcgaaaacgattaccacaataactacaccaaatccccgt
accgggggagagcatccagctattatttccagagggccttgtaatcgtttgctactacta
tatccaggtaaccaaataactatattggactcaaaaacaaacaaagtcctcagagaaata
gaggtagattccgccaatgagattatatatatgtatggtcacaacgaggtcaacacagag
tacttcatctgggcggataatagaggaaccataggatttcaatcctacgaggatgattcc
cagtatattgttcattctgctaaatcagatgttgagtacagcagcggtgtcctacataag
gattcattattattagccctttactctccggacggtatattagacgtttacaacttgtca
tcacctgaccaggcaagctctagattccccgtagatgaagaagccaagataaaagaggtt
aaatttgcagacaatgggtactggatggtagtagagtgtgaccaaactgtggtttgcttt
gacctaagaaaggatgtcggcacgctagcgtatccaacttacacaatcccagaattcaag
acgggcaccgttacctatgacattgacgactctggaaagaatatgattgcatactcaaac
gagagcaattcgctgacgatatacaaatttgacaagaaaacaaaaaattggactaaagac
gaggagagcgccctctgtttgcaaagcgacactgccgatttcactgatatggacgtggta
tgcggagatggtggtattgccgctattctgaagacaaatgatagtttcaatattgttgca
ttgacaccctaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   MIPS-SCE (1)   
   OC (1)   
   SGD-SCE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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