KEGG T00005: YNL016W

Saccharomyces cerevisiae (budding yeast): YNL016W

Entry

YNL016W CDS T00005

Gene name

PUB1, RNP1

Definition

Pub1p

Orthology

K13201

nucleolysin TIA-1/TIAR

Organism

sce Saccharomyces cerevisiae (budding yeast)

Class

SSDB

Motif

Pfam:

RRM_1 RRM_6 RRM_5 Nup35_RRM_2 Limkain-b1

Other DBs

NCBI-GI:

NCBI-GeneID:

SGD:

MIPS:

UniProt:

Structure

PDB:

3MD1 3MD3 2LA4

Position

XIV:602907..604268

AA seq 453 aa
MSENNEEQHQQQQQQQPVAVETPSAVEAPASADPSSEQSVAVEGNSEQAEDNQGENDPSV
VPANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFV
EYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQSSSDDTFNLFVGDLNVNVDDETLRN
AFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK
RDNNNNNNYQQRRNYGNNNRGGFRQYNSNNNNNMNMGMNMNMNMNMNNSRGMPPSSMGMP
IGAMPLPSQGQPQQSQTIGLPPQVNPQAVDHIIRSAPPRVTTAYIGNIPHFATEADLIPL
FQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCIVALANFPFQGRNLRTGWGKERSNFMPQ
QQQQGGQPLIMNDQQQPVMSEQQQQQQQQQQQQ

NT seq 1362 nt +upstreamnt +downstreamnt
atgtctgaaaataacgaagaacaacatcaacaacaacaacaacagcaacctgttgccgtc
gaaactccctcggcagttgaagctccagcatcagcagatccttcttctgaacagagcgtc
gctgtcgaaggcaattctgaacaagctgaagacaatcagggtgaaaatgatccttccgta
gttcctgctaatgctattaccggtggtagggaaacttccgatagagttttatatgttggt
aacctagacaaagctatcaccgaagacattttaaagcaatatttccaagttggcggacca
attgctaacatcaaaatcatgatcgataagaataataagaacgtcaattacgcttttgtt
gaataccatcaatctcacgatgccaatattgccttacaaacattgaacggcaaacaaatt
gaaaacaacattgtcaaaatcaactgggccttccaatcccaacagagttcctccgatgat
acatttaacttgtttgtcggtgatttgaatgttaatgttgatgacgaaactttaaggaat
gccttcaaagacttcccatcctacttgagtggtcatgttatgtgggacatgcaaactggt
agttcaagaggttacggttttgtttcctttacttctcaagatgatgcacaaaatgccatg
gacagcatgcaaggtcaagatttgaatggtagaccgctaagaatcaactgggctgctaag
cgtgataacaataacaataataattatcaacagcgtcgtaactacggtaacaacaaccgt
ggtggtttccgtcaatataacagtaacaacaataacaacatgaatatggggatgaatatg
aacatgaatatgaatatgaacaacagcaggggcatgccaccaagttcaatgggaatgcca
attggcgccatgccattaccatctcaaggccaaccccaacaatcccagaccattggttta
cctcctcaagtaaatcctcaagctgttgaccacatcattagaagtgccccaccaagagtt
actactgcctatatcggtaatattccgcactttgccactgaagctgatttaattccgttg
ttccagaacttcggttttattttagatttcaagcactatccagaaaagggctgttgcttc
ataaagtatgacactcatgaacaggccgctgtttgtattgttgccttggcaaacttccca
tttcaaggcagaaacttgagaaccggttggggtaaggaaagatcaaattttatgccacag
cagcagcaacagggcggtcagccacttataatgaatgaccaacaacaaccggttatgtct
gagcaacaacagcaacagcagcaacagcagcaacaacaataa

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   MIPS-SCE (1)   
   OC (1)   
   SGD-SCE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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