KEGG T00005: YOR005C

Saccharomyces cerevisiae (budding yeast): YOR005C

Entry

YOR005C CDS T00005

Gene name

DNL4, LIG4

Definition

DNA ligase (ATP) DNL4 (EC:6.5.1.1)

Orthology

K10777

DNA ligase 4 [EC:6.5.1.1]

Organism

sce Saccharomyces cerevisiae (budding yeast)

Pathway

sce03450

Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:sce03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M BRCT DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme Fve

Other DBs

NCBI-GI:

NCBI-GeneID:

SGD:

MIPS:

UniProt:

Structure

PDB:

1Z56

Position

XV:complement(334509..337343)

AA seq 944 aa
MISALDSIPEPQNFAPSPDFKWLCEELFVKIHEVQINGTAGTGKSRSFKYYEIISNFVEM
WRKTVGNNIYPALVLALPYRDRRIYNIKDYVLIRTICSYLKLPKNSATEQRLKDWKQRVG
KGGNLSSLLVEEIAKRRAEPSSKAITIDNVNHYLDSLSGDRFASGRGFKSLVKSKPFLHC
VENMSFVELKYFFDIVLKNRVIGGQEHKLLNCWHPDAQDYLSVISDLKVVTSKLYDPKVR
LKDDDLSIKVGFAFAPQLAKKVNLSYEKICRTLHDDFLVEEKMDGERIQVHYMNYGESIK
FFSRRGIDYTYLYGASLSSGTISQHLRFTDSVKECVLDGEMVTFDAKRRVILPFGLVKGS
AKEALSFNSINNVDFHPLYMVFDLLYLNGTSLTPLPLHQRKQYLNSILSPLKNIVEIVRS
SRCYGVESIKKSLEVAISLGSEGVVLKYYNSSYNVASRNNNWIKVKPEYLEEFGENLDLI
VIGRDSGKKDSFMLGLLVLDEEEYKKHQGDSSEIVDHSSQEKHIQNSRRRVKKILSFCSI
ANGISQEEFKEIDRKTRGHWKRTSEVAPPASILEFGSKIPAEWIDPSESIVLEIKSRSLD
NTETNMQKYATNCTLYGGYCKRIRYDKEWTDCYTLNDLYESRTVKSNPSYQAERSQLGLI
RKKRKRVLISDSFHQNRKQLPISNIFAGLLFYVLSDYVTEDTGIRITRAELEKTIVEHGG
KLIYNVILKRHSIGDVRLISCKTTTECKALIDRGYDILHPNWVLDCIAYKRLILIEPNYC
FNVSQKMRAVAEKRVDCLGDSFENDISETKLSSLYKSQLSLPPMGELEIDSEVRRFPLFL
FSNRIAYVPRRKISTEDDIIEMKIKLFGGKITDQQSLCNLIIIPYTDPILRKDCMNEVHE
KIKEQIKASDTIPKIARVVAPEWVDHSINENCQVPEEDFPVVNY

NT seq 2835 nt +upstreamnt +downstreamnt
atgatatcagcactagattctatacccgagccccaaaactttgcgcctagtccagatttc
aaatggctttgtgaagagctatttgtgaagatacatgaagttcaaattaatggaacggcc
ggcactggcaaatcaaggtctttcaagtactatgaaataatatcgaatttcgtcgaaatg
tggagaaaaaccgtgggaaataatatatatcctgcactggttcttgctcttccctaccgc
gatagacgaatctataatattaaggattatgtattaataagaactatatgctcttacttg
aagttgccaaaaaattctgcaacagagcagcggttaaaagattggaaacagcgtgtcggt
aaaggtgggaatctttcttctcttcttgtggaagaaattgctaaaagaagggctgaacct
agctcaaaagcgattacaattgataacgtcaatcactatctggatagtttgagtggagac
aggttcgcttccggacgaggatttaagagtcttgtcaagtccaaacctttcctgcactgt
gtggagaatatgagtttcgtcgaattaaaatacttctttgatatcgtgcttaaaaataga
gtaataggaggtcaagagcacaaattgctaaactgctggcatcctgatgctcaggattat
cttagcgtgatatctgatttaaaggtggtaacttcaaaactttatgatccaaaagttcgt
ctaaaggatgatgatttgagtataaaagttggctttgcattcgccccccaattagccaaa
aaagtgaatctttcttatgagaaaatatgccgtacactacatgatgattttttggtagaa
gaaaaaatggatggagaacgaattcaagttcattatatgaattatggtgaatccataaaa
ttttttagtagacggggcatcgactatacctatttgtacggagcgagcttatcatcagga
actatatctcaacatttgaggtttacagatagtgttaaagaatgtgttttagatggagaa
atggtgacgtttgatgcaaaaagacgggtgattcttccattcggtcttgttaaaggaagt
gcaaaggaagcgctatcttttaatagtataaataatgttgactttcaccccttatatatg
gtgtttgatctgttatacctgaatgggacttcgttgacaccattaccccttcatcaaagg
aagcaatatctgaacagcattttaagtcccttgaaaaatattgtagaaatagtacgatct
tctagatgttatggtgtggagtcaatcaaaaagtctttagaagttgcaatctcactgggt
tcagaaggagttgttttgaaatattataattcaagttataatgtcgccagtcgaaacaac
aactggatcaaggtaaaacctgaatatttggaggaatttggagagaatttagacttaata
gtaataggcagagattctgggaaaaaagattcttttatgctagggttacttgtgctagat
gaagaagagtataaaaagcaccaaggagactcctctgaaattgtagaccactcaagccaa
gaaaaacacatacaaaattcaagaagaagggtgaaaaaaatactttcattctgttctatc
gcaaacggtatatctcaagaagaattcaaagaaatcgaccgcaaaacgagaggacattgg
aaaagaacctccgaagttgctccccctgcttcaattttagaatttggctcaaaaatacct
gccgaatggattgaccccagtgaatcaattgttctagaaataaaatcacggtctttggat
aacacagaaacgaatatgcagaagtacgctaccaattgtactttgtacggtggctattgt
aaaagaatacggtacgataaagaatggacagattgttacacacttaacgacttatacgaa
agtaggacggttaaatctaaccccagctatcaagcggaaaggtcacagcttggattgata
cggaaaaagagaaagagagtacttatttcagacagctttcaccaaaacaggaaacaactg
ccaatttcaaacatctttgccggattacttttttatgttctctctgactatgtcacggag
gacactggaatacggattacacgggcagaacttgaaaaaactattgtggaacatggtggt
aaactgatatataatgtaattttaaaacgtcattcaattggggacgttcggttaatcagc
tgtaaaactaccacggaatgcaaggctttaatagatcgaggatatgatatattgcaccca
aattgggtactcgattgtatagcatataagaggctcatcctgatcgagcccaattattgc
tttaacgtctctcaaaaaatgagagccgtcgctgaaaaaagggtagattgtttgggtgat
agttttgaaaatgacatttcggaaaccaaactgtcatcattgtataaatcacaactaagt
ctaccaccgatgggggaactcgagatagattctgaggttcggcggtttccattattttta
ttctccaacaggattgcatacgtaccacgtcgcaaaattagcacagaagatgacattata
gaaatgaaaattaagttgtttggtggaaaaataacagatcaacagtcactttgtaactta
ataattataccatatactgatcctattttgaggaaagactgcatgaatgaggtacacgaa
aaaataaaagaacaaataaaggcttctgatactataccgaaaatagccagggtcgttgcc
cctgaatgggtggatcattctattaatgaaaactgtcaagtgcctgaagaagacttcccc
gtagtcaactactga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   MIPS-SCE (1)   
   OC (1)   
   SGD-SCE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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