KEGG   Saccharomyces cerevisiae (budding yeast): YPR088C
Entry
YPR088C           CDS       T00005                                 
Symbol
SRP54, SRH1
Name
(RefSeq) RNA-binding signal recognition particle subunit SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03060  Protein export
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    YPR088C (SRP54)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sce02044]
    YPR088C (SRP54)
Enzymes [BR:sce01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     YPR088C (SRP54)
Secretion system [BR:sce02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   YPR088C (SRP54)
  Eukaryotic Sec-SRP protein
   YPR088C (SRP54)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW CbiA nSTAND3 MobB Zeta_toxin AAA_17 AAA_33 AAA_22 MipZ AAA_18 VirC1 AAA_30 APS_kinase ATP_bind_1 MeaB AAA_16 AAA_31 AAA AAA_24
Other DBs
NCBI-GeneID: 856203
NCBI-ProteinID: NP_015413
SGD: S000006292
UniProt: P20424
Position
XVI:complement(711403..713028)
AA seq 541 aa
MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ
LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS
GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA
EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQ
SKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFIS
KLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQM
IPGMSNMMNQVGEEETSQKMKKMVYVLDSMTKEELESDGRMFIEEPTRMVRVAKGSGTSV
FEVEMILMQQQMMARMAQTATQQQPGAPGANARMPGMPNMPGMPNMPGMPNMPGMPKVTP
QMMQQAQQKLKQNPGLMQNMMNMFGGGMGGGMGGGMPDMNEMMKMMQDPQMQQMAKQFGM
G
NT seq 1626 nt   +upstreamnt  +downstreamnt
atggttttggctgatttggggaagcggattaattctgctgtgaataacgcgatttccaat
acacaggatgactttactacatccgtagatgtaatgttaaagggcatcgtgactgcgttg
ttagaatcggatgtgaatattgccctggtttctaagttacgaaataatataaggtcacag
ctgctgagtgagaaccgtagtgagaagtccacaacaaacgcacaaactaagaagcttatt
cagaaaacggtgtttgatgaactgtgtaagttggtcacctgcgaaggtagtgaagagaag
gcctttgtgcccaagaagagaaagacaaacatcatcatgtttgttgggctgcaaggttca
ggtaaaactacttcctgtaccaagttagcagtttactactcgaagagaggtttcaaagtg
ggtttggtatgtgcggatactttccgtgctggtgcatttgaccaattgaaacaaaacgct
ataagagcaagaattccattttatgggtcatatacggagactgaccctgccaaagttgca
gaagaaggtattaacaagtttaagaaagagaagtttgatatcatcatcgttgatacttca
ggtaggcatcatcaagaagaagagttgttccaagaaatgattgaaatatccaatgtcatc
aagcctaatcaaactatcatggttttagatgcttccattggtcaagctgcagagcaacaa
tccaaggctttcaaagaatcgtccgattttggtgccattatattaaccaagatggacggc
cacgctagagggggtggggcaatttcggccgttgcagccacaaacactccgattatcttt
attggtacaggtgagcacattcatgatttggaaaagttctcgcctaagtcattcatatct
aaactgttgggtattggtgatatagagagtctctttgagcaattacaaaccgtttccaac
aaggaagatgcaaaagccacaatggaaaacatccaaaagggtaagttcaccttgctagat
ttcaagaaacagatgcaaacaataatgaaaatgggtccattatcaaatatagcgcagatg
attcctggtatgagtaatatgatgaatcaagtaggggaggaggaaacctctcaaaagatg
aagaaaatggtttacgttttggattctatgactaaagaagaactagaatctgatggtaga
atgttcattgaagagcctacaagaatggttcgtgtagctaaaggttcaggtacttctgtg
ttcgaggtagaaatgatattgatgcaacagcagatgatggcaagaatggcacaaaccgca
acccagcaacaaccaggagcccctggtgccaatgctaggatgcctggcatgccaaacatg
ccgggtatgccaaacatgcctggtatgccgaatatgcctggtatgccaaaagtgactcca
caaatgatgcagcaggcacaacaaaagctgaagcaaaatccaggtctaatgcaaaatatg
atgaacatgtttggtggcggaatgggcggaggaatgggcggaggaatgcctgatatgaac
gaaatgatgaaaatgatgcaagatccacaaatgcaacaaatggcaaaacaattcggtatg
ggctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (22)   
   Pfam (22)   
All databases (49)   

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