KEGG   Streptococcus constellatus subsp. pharyngis C1050: SCI_1739
Entry
SCI_1739          CDS       T02832                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
scg  Streptococcus constellatus subsp. pharyngis C1050
Pathway
scg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:scg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SCI_1739 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scg03021]
    SCI_1739 (rpoC)
   03400 DNA repair and recombination proteins [BR:scg03400]
    SCI_1739 (rpoC)
Enzymes [BR:scg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SCI_1739 (rpoC)
Transcription machinery [BR:scg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SCI_1739 (rpoC)
DNA repair and recombination proteins [BR:scg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SCI_1739 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: AGU80634
Position
complement(1795653..1799291)
AA seq 1212 aa
MVDVNRFQSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIICDRCGVEVTRTKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEHKSIMTEREYRERLREYGSGSFVAKMGAEAIQDLL
KQVDLEKEIAALKEELKTATGQKRVKAIRRLDVLDAFQKSGNKPEWMVLNILPVIPPDLR
PMLQLDGGRFASSDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVARDIVQNVKAAKRLVERSDERIWDILEDVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARILMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEEAGREGEGMVFKDRDEAVMALRNGYVHLHTRVGI
ATDSLNKPWTENQKHKILLTTVGKILFNDIMPDELPYLQEPVASNIAEGVPAKYFLEPGQ
DVKEAISKLELNVPFKKKNLGNIIAEIFKRFRTTETSAFLDRLKDLGYHHSTLAGLTVGI
ADIPVVEDKAEIIEESHKRVEQITKQFRRGMITDDERYNAVTAEWRAAREKLEKRLVANQ
DPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTARGLVIRSITDGKEMIEPLE
ERLIGRYTKKSVKHPETGEVIVGPDVLITEDVAHEIINAGIEEVTIRSVFTCNTRHGVCR
RCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRVQEI
FEARNPKGEAVITEVKGEVTAIEEDASTRTKKVFVKGATGEGEYVVPFTARMKVAVGDQV
SRGAALTEGSIQPKHLLAVRDVLSVETYLLAEVQKVYRSQGVEIGDKHIEVMVRQMIRKV
RIMDPGDTDLLMGTLMDITDFTDANRDVVISGGVPATARPVLMGITKASLETNSFLSAAS
FQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNLEPQAVNEVEIIEDTT
ATETVEETTPAK
NT seq 3639 nt   +upstreamnt  +downstreamnt
gtggttgatgtaaatcgttttcaaagtatgcaaatcaccctagcttcacctagtaaagtc
cgctcttggtcttatggggaagtgaagaaacctgaaacaattaactaccgtacactaaag
ccagaacgtgaaggactttttgatgaagtcatctttggtcctacgaaagattgggaatgt
gcgtgtggaaagtataaacggattcgttataaaggaatcatttgtgaccgttgtggtgtt
gaagtcactcgtacaaaagtgcgtcgtgagcgtatgggacatattgagttaaaggctcct
gtttctcatatttggtattttaaagggattccgagtcgcatgggcttgacattggatatg
agtcctcgtgctcttgaagaagtcatttattttgcagcttatgtggtgattgatccaaaa
gatacgccacttgagcacaaatctattatgacggagcgggaatatcgtgaacgcttgcgg
gaatacggttcaggatcatttgttgcaaaaatgggtgctgaagctatccaagatctcttg
aaacaagtagatttggaaaaagaaattgcagccctcaaagaagaattaaaaactgcaact
gggcaaaagcgcgtcaaagcgatacgccgcttagatgttttagatgctttccaaaaatct
ggtaacaaaccagaatggatggtcttaaacatcttgccagttattccgccagacttacgt
ccaatgcttcagctggacggtggacgctttgcttcctctgacttgaacgatctttaccgt
cgtgttatcaatcggaacaatcgtttggcacgtcttttggagctgaatgctcctggaatc
atcgtgcaaaatgaaaagcggatgttgcaagaagcggttgatgcgttgattgacaacggt
cgtcgtggtcgtccaattactggaccaggtagccgcccgctcaaatcattgagccacatg
cttaaaggaaaacaaggtcgtttccgtcaaaacttgctcggaaaacgggttgacttctca
ggacgttcggttattgcggtaggtccaaccctcaaaatgtaccaatgtggtgtgccgcgc
gaaatggcaattgagcttttcaaaccatttgttatgcgtgaaattgtagcgcgtgatatt
gtgcaaaacgtgaaagctgctaaacgcttggtggaacgcagtgatgaacgtatttgggat
atcttagaggatgtcattaaagaacacccggtactccttaaccgcgcaccgacacttcac
agattaggaattcaagcatttgagccagtcttaattgacgggaaagctcttcgtttgcac
ccgcttgtgtgtgaggcctacaatgccgactttgacggagaccaaatggctattcacgta
ccattgtcggaagaagctcaggcagaagcacggattcttatgctagctgctgagcacatc
ctcaatccaaaagacggtaagccagtcgtaacaccgtcacaagatatggtcttggggaat
tattacctaacgatggaagaagccggtcgtgaaggtgaaggtatggtctttaaagatcgt
gatgaagctgtaatggctcttcggaatggttatgtgcacttgcatacgcgtgttgggatt
gcgacggatagtttaaacaaaccatggacggaaaatcaaaaacacaagattcttttgaca
acagttggtaagattcttttcaatgacatcatgccagatgaattgccgtatttgcaagaa
ccagttgcctcaaacatagcagaaggtgtgccagctaaatacttcttagaacctggtcaa
gatgtcaaagaagccatcagtaaacttgaattaaacgtaccatttaagaagaaaaatctc
gggaatatcattgctgagatcttcaaacgtttccgtacaactgaaacgtctgcttttcta
gaccgtctgaaagatctcggctatcatcattcaacgcttgctggtttgacagtagggatt
gccgatattccagtcgttgaagataaggcagaaattatcgaagagtcacataaacgtgtt
gaacaaatcacgaaacaattccgtcgtgggatgattacagacgatgagcgctataacgcg
gttactgcagaatggcgtgctgctcgtgaaaaattggaaaaacgcttggttgctaaccaa
gatccgaagaatccaatcgttatgatgatggactctggagcccgtggtaacatctctaac
ttctcgcaacttgccggtatgcgtggtttgatggctgctcctaatggccgtatcatggag
ttgccaatcttgtctaacttccgtgaaggtttgtctgttctggaaatgttcttctcaact
cacggagcgcgtaaagggatgactgatacagcccttaagactgccgactcaggttatttg
actcgtcgcttggttgatgtggcgcaagatgttatcattcgtgaagacgattgtggaact
gcccgtggtcttgtgattcgctctattactgacggcaaagaaatgattgaaccattggaa
gagcgcttgattggtcgttatacgaagaaatcggttaaacatcctgaaacaggtgaagtc
atcgttggtccagatgtattaattacagaagatgtagcgcatgaaattatcaacgctggt
atcgaagaagttactatccgttctgtctttacatgtaatacacgtcatggcgtttgccgt
cgctgttatggtatcaacttggcaacgggcgacgctgttgaagttggggaagcagttgga
accattgctgcccaatctatcggtgaacctggtacacaattgactatgcggactttccat
acgggtggtgttgcttctaatactgatattactcaggggcttcctcgggttcaagaaatc
tttgaagcccgtaatccaaaaggggaagcagtcatcacagaagttaaaggtgaagttact
gctattgaagaagatgcttctactcggacgaagaaggtctttgttaaaggtgcaactggt
gaaggcgaatatgtagtgccatttacagcccgtatgaaagtggctgtaggcgaccaagtt
tctcgcggagcagcattaacagaaggttctatccaaccgaaacatttattggctgttcgt
gatgtcttgtctgttgagacttacctgctagctgaagtgcaaaaagtttaccgcagtcaa
ggggtagaaatcggtgacaagcatattgaagtaatggttcgccaaatgattcgtaaggtg
cgcatcatggatccgggagatactgatcttcttatgggcacactcatggatattacagac
tttaccgatgctaaccgagatgtagttatctcaggcggtgttcctgcaacagctcgtcct
gttcttatgggaattaccaaggcttctctggaaaccaacagtttcttatcagctgcctct
ttccaagaaaccactcgtgttctgactgatgcggctatccgtggtaagaaagatcacttg
cttggtctaaaggaaaatgttatcattggtaaaatcattccagctggtacaggtatggca
cgctaccgtaatcttgagccgcaagctgtcaatgaagttgaaattatcgaagatacaacg
gcaacagaaactgtggaagaaaccacaccagcaaaataa

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