KEGG   Sphingobium chlorophenolicum: Sphch_2916Help
Entry
Sphch_2916        CDS       T01522                                 

Definition
Formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sch  Sphingobium chlorophenolicum
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sch00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Sphch_2916
Enzymes [BR:sch01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Sphch_2916
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Sphch_2916
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1:3079466..3080278
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTVAGLRSVLEGAVLTRVEARRADLRFPIPVDLRQRLTGATVTALSRRAKYG
LIDTDRGDTLIFHLGMSGRWRIDPAEIGAHDHLLIETGGGRLLSLNDPRRFGSLDLVRSE
AWEAYSPFTRMGPEPLGPDFTPDTLAAALKGKATSIKAALLDQRIVAGLGNIYVCEALNM
AGIAPTREAGKIGRARLILLVEAIRDVLAAAIAAGGSTLRDYARPDGELGYFSKQWRVYG
REGEPCHCGTPIRRRVDGGRSTFFCPKCQK
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgccagaactccccgaagtcgaaaccaccgtcgcgggccttcgctcggtcctcgaaggc
gctgtcctcacccgcgtggaggcgcgccgcgccgatctgcgcttcccgattcccgtcgac
ctgcgccagcgtctgaccggcgccaccgtcaccgccttgtcgcgccgcgccaaatatggg
ctgatcgacaccgatcgcggcgacacgctgatctttcacctcggcatgtccggccgctgg
cgaatcgatccggcggagatcggggcgcacgaccatctcctgatagagacggggggcggg
cggctgctctccctcaacgatccgcgccgcttcggctcactggacctcgtccgcagcgaa
gcctgggaagcctatagtcccttcacccgcatggggcctgagcctttggggccggatttc
acgcccgatacgctcgccgccgcgctcaagggcaaggcgacctcgatcaaggccgcgttg
ctggaccagcgcatcgttgcgggcctgggcaatatctatgtctgtgaagcgctcaacatg
gcgggaatcgctcccacgcgcgaggcggggaagatcggccgcgcccgcctcatcctgctg
gtggaggcgattcgcgacgtgctggccgccgccattgccgcgggcggctccaccctgcgc
gactatgcgcggcccgacggcgaactcggctatttctccaaacaatggcgagtctatggc
cgggaaggggagccgtgccactgcggcacgccgatccgccgtcgcgtggacgggggcaga
tcgacctttttctgcccgaaatgccagaaatag

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